Miscanthus floridulus: 136472229
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Entry
136472229 CDS
T10264
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136472229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136472229
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136472229
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136472229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
136472229
NCBI-ProteinID:
XP_066326057
LinkDB
All DBs
Position
1:8450513..8453263
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AA seq
264 aa
AA seq
DB search
MEPKGETKLDGVTMAMGALDCPICYEPLVPPIYQCGVGHLICNSCCIRLNKCPLCPRSAF
ERCFGMERVVESIEVPCCFAENGCTKKITYFNKKKHEKACRHGPCFCPEPGCGFSGPAAT
LPDHFTDCHMWPNTAFKYYTQFGLRLQPGPHVLRAQDGTVFLMNVVAAEPLGHAISLVCV
RPATGSSPFGCSLVFSCFTGHHQISTLDPVRCSTLADGLPKDGFCIVPKASGGIHDVVLK
TNIYEVRRYDIELGDEDESYDEEL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaaggggaaactaagttggatggagtgacaatggcaatgggtgccttggac
tgccccatctgctatgagccccttgtgcctcccatttaccagtgtggtgtggggcacctg
atctgcaattcatgctgcatcaggctcaacaaatgccccctatgcccaaggtctgccttc
gagcgctgctttggcatggagcgcgttgttgaatccattgaggttccttgttgcttcgcc
gagaacggatgcaccaagaagatcacctacttcaacaagaaaaagcacgagaaggcgtgc
cgacacgggccatgcttctgcccggagcctggctgtggcttctcagggccggcggcgacg
ctgccagaccatttcaccgactgccacatgtggccaaatacggcgttcaagtactacacg
cagttcggcctccgcctccagccgggcccgcacgtcctccgtgcccaggatggcaccgtc
ttcctcatgaacgtggtggcagcggaacccctcgggcacgccatctccctcgtctgtgtc
cggccggccacgggctcctccccgttcgggtgctctttggtgttctcgtgcttcacaggc
caccaccagatctcgacgctggaccccgtgaggtgctcgacgctggctgatggtctgcca
aaggacggcttctgcatcgtgcccaaggcatctggaggcatccatgatgtcgtgctcaag
accaacatatatgaagtgcggaggtatgatatcgagctgggggacgaggacgagagctac
gacgaggaactctga
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