Miscanthus floridulus: 136472972
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Entry
136472972 CDS
T10264
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
136472972
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
136472972
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
136472972
NCBI-ProteinID:
XP_066326768
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Position
8:94269622..94273892
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AA seq
663 aa
AA seq
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MGKLSCSSLCACCMGPPREASPAGPAVDATAGVTVEVSDRYVEIKNGIFELTLSNPDGIV
TGVRYNGVDNLMEILNKEDNRGYWDLVWNPQGQKTGIFDVIKGTEFRIIYQDENQAEVSF
TRNWDPSLEGKAVPLNIDKRFIVLRGSSGFYTYGIYEHKEGWPDFGLGETRVAFKLRKDK
FHYMALADDRQRIMPMPDDRLPPRGQPLAYPEAVLLVDPINPDLRGEVDDKYQYSCEDQY
NNVHGWMSFDPPIGFWQITPSDEFRTGGPLKQNLTSHVGPTMLAMFLSAHYAGDDLSPKF
TNGEYWKKVHGPVFMYLNSSWDGSDPTMLWEDAKVQMMIEKENWPYCFALSEDFQKTEQR
GCVSGRLLVRDRYIDDQDLYASGAYVGLALPGEAGSWQRECKGYQFWCRADVDGSFYIRN
IVTGNYNLYAWVPGFIGDYRLDATLTIASGDDIYLGDLVYEPPRDGPTMWEIGVPDRSAA
DFYVPDPNPNYVNRLYINHPADRFRQYGLWERYAELYPNSDLVYTVGQSDYSTDWFYAQV
NRKLDDNTYQPTTWQIKFNLDSVSPSSTYKFRVALASSALAELQIFFNDQDKALPHFATG
LIGRDNAIARHGIHGLYWLFNIDVASAWLVQGVNTIYLKQSRSQNPFQGLMYDYLRLEGP
CGC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcttagctgcagcagtctctgtgcctgctgcatgggccctccgcgggaggcc
tcgccggccggccccgccgtcgatgccaccgccggcgtcacggtcgaggtcagcgacaga
tatgtcgagataaaaaatggcatctttgagctgacgctgtccaacccggacggtatcgtc
accggcgtgcgctacaatggcgtggacaatctcatggagattcttaacaaggaagacaac
agagggtactgggaccttgtttggaacccacaaggacaaaaaactggcatctttgatgtg
atcaaaggcaccgaattccgcatcatataccaagatgaaaaccaggctgaggtatccttc
accagaaattgggatccttcccttgaaggaaaagctgtccccttgaacatcgataagagg
ttcatcgttctccgtggttcatccgggttctacacctatggaatctatgagcataaggaa
ggatggcctgatttcggcttgggagagacaagggtggctttcaagctgcggaaagacaag
tttcattacatggcattggctgatgacaggcagagaattatgccaatgcccgacgaccga
ttgcctccccgaggccagccattagcataccctgaggctgtgctccttgtggacccaata
aatcctgatctcagaggggaggttgacgacaagtaccagtactcttgcgaagaccagtac
aacaatgtccatgggtggatgtcattcgatcctccaattggcttctggcagatcactcca
agtgatgagttcaggacaggaggacccctgaagcaaaatttgacttctcatgttggcccc
actatgctggctatgtttcttagtgcacattatgcgggggatgacctctcaccaaagttt
acgaatggagaatactggaaaaaggtccatggaccggtattcatgtatcttaattccagt
tgggatggaagtgacccaactatgctatgggaagatgcaaaagttcagatgatgattgag
aaagaaaactggccatactgttttgcactttcagaggactttcagaagacagagcaaagg
ggttgcgtctctggtagattactagtccgagacaggtatatagatgatcaagacctttat
gcctcaggagcctatgtaggcttggcgctaccaggagaagctggatcctggcaaagagag
tgcaagggataccaattctggtgtagagcagatgtagatgggagcttctacataaggaac
attgtaactgggaactacaacctatatgcgtgggttccgggttttataggggactacaga
ttagatgctacactgaccatagcttcaggggatgatatttatttgggtgaccttgtgtat
gaaccaccaagagatgggccgacgatgtgggagattggagtacctgatcgatctgccgct
gacttttatgttcctgatcctaaccccaactatgtcaatagattgtacatcaaccatcct
gcagatagatttagacaatatggactttgggaacgatatgcggaactataccctaacagt
gacctggtatacacagttggccaaagtgactatagcaccgattggttctatgctcaagtt
aacagaaaacttgatgacaacacttaccagccaacaacatggcaaataaagttcaacctt
gacagtgtcagtccaagcagcacctacaagttcagagtggctctcgcgtcttctgcactc
gctgagctgcagattttcttcaacgatcaggacaaggctcttcctcacttcgccaccggg
ctgatcggcagggacaacgcgatagcaaggcacgggatacatgggctgtactggctgttc
aacatcgatgtggctagtgcttggcttgtgcaaggggtgaacaccatctacctgaagcag
tccaggagccagaacccgtttcaaggattgatgtacgactacttgcgtttggaggggccg
tgtggctgctaa
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