Miscanthus floridulus: 136474331
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Entry
136474331 CDS
T10264
Name
(RefSeq) RAN GTPase-activating protein 2-like
KO
K14319
Ran GTPase-activating protein 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136474331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136474331
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
136474331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_NLRC3
LRR_CARMIL
LRR_TMOD-LMOD
LRR_6
LRR_4
LRR_NLRC4
LRR_MHP1-HER1-GIP3
LRR_14
LRR_9
LarA_C
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
136474331
NCBI-ProteinID:
XP_066328021
LinkDB
All DBs
Position
8:188861803..188864106
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AA seq
543 aa
AA seq
DB search
MDSTQDFQPRTFSIKLWPPSESTRLMLVERMTENLSTESIFSRKYGLLGKQEAHENAKRI
EELCFASADEHFKREPDGDGSSAVQLYAKETSKLMLEVLKKGPRTTAELEAPVADTPPVP
ADIVLDISGGKRAFIEADEAKELLSPLTKPGNSYKRICFSNRSFGIGAAHVAGPILEAVK
NQLTEVDISDFVAGRPEEEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFSELLKS
QESLEELYVMNDGISEEAAKALFELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNV
ESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELY
LSDLNLENEGTIAIAKALKQSAPQLEVLEIAGNEINAKAAPVLAECLAAMQSLKKLTLAE
NELKDDGAVIIAKSLDDGHTDLKELDVSTNMLQRVGARCFARAVAYKPAFVQLNMNGNFI
SDEGIDEVKDILKAGKKSLDVLGSLDENEPDGEPDDEEEDEDAEDNEDELDSKLQSVKVE
QDD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacacaagatttccaacccaggacattctctataaagttgtggccaccaagt
gaaagcacacggctcatgcttgttgagaggatgacagagaatctgtccacagagtccatt
ttctctcgcaagtatggtcttttgggcaagcaagaggctcatgagaatgcaaaaaggatt
gaagaactttgctttgcctcggctgatgagcatttcaaaagggagccagatggcgatggg
agttctgctgtccagctatatgcaaaggaaacgagcaagctgatgttggaagttctgaaa
aaaggcccaaggactactgcagaactggaggcacctgtagctgatacgcctcctgtgcct
gctgatattgtactagatatatctggtggcaagcgtgcatttattgaggcagatgaagca
aaggaactgctgagtccacttaccaaaccaggaaattcgtataaaagaatttgctttagc
aacaggagctttggtattggtgctgctcatgttgctgggccaattcttgaggcagttaag
aatcagctcacagaggttgatatctcagattttgtggcaggaaggcctgaggaggaagcc
cttgatgtgatgcgcatattctccaaagcattagagggttctgtcctgagatatctgaac
atctctgacaacgctttgggtgagaagggtgtcagggcattcagtgagctcctgaaatca
caggaatccctggaagaactctatgtgatgaatgatggcatatcagaggaagctgcaaaa
gctctatttgagcttattcctgcaactgagaagctcaaggttcttcactttcacaacaac
atgactggagatgaaggtgctatgtatatcgctgagatggttaagcgttctccaaatgta
gagagtttcaggtgctcagcaacaaggataggatctgatggtggagtcgcattgtctgag
gcattagggacatgcactcgtctgaagaaacttgatctcagggacaacttgtttggtgtt
gatgcagggttagctctcagcaaaacccttccaaagcttcctgatcttgtcgagctttat
ctcagtgatctcaatctcgagaacgagggtacaatagcaattgccaaagccctcaaacag
tcagcaccacagttggaggtccttgaaattgctggaaatgaaataaatgcaaaagcagcc
ccggttttggctgaatgcctagcagcaatgcagtcactcaagaagctgaccttggctgaa
aatgaacttaaggatgatggtgctgtgataattgcaaaatcattggatgatggccacaca
gatctcaaggaacttgatgtgagcacaaatatgctgcagagggttggagctcggtgcttt
gcgcgggcagtcgcatataaaccagcttttgtgcaactgaacatgaatggaaatttcatc
tctgatgaagggattgatgaggtgaaggacattctgaaggctggtaagaaatccctagat
gtgctgggctcactggatgagaatgaacctgatggagagcctgatgatgaggaagaggac
gaggatgctgaggacaatgaggacgagctggattcaaagctgcagagtgtgaaggttgag
caggatgattga
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