Miscanthus floridulus: 136474997
Help
Entry
136474997 CDS
T10264
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03410
Base excision repair
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136474997
03410 Base excision repair
136474997
03420 Nucleotide excision repair
136474997
03430 Mismatch repair
136474997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136474997
03036 Chromosome and associated proteins [BR:
mflo03036
]
136474997
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136474997
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136474997
DNA Replication Termination Factors
ELG1-RFC complex
136474997
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136474997
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136474997
Check point factors
HRAD17(Rad24)-RFC complex
136474997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
Rad17
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
DNAX_ATPase_lid
AAA_assoc_2
AAA_16
AAA_11
AAA_5
DUF815
AAA_7
RuvB_N
ATPase_2
AAA_14
nSTAND_NTPase5
AAA_30
bpMoxR
DUF3086
nSTAND3
AAA_19
ResIII
AAA_24
AAA_3
AAA_2
SLFN-g3_helicase
TniB
TIP49
AAA_28
MCM
Mg_chelatase
nSTAND6
ABC_tran
Motif
Other DBs
NCBI-GeneID:
136474997
NCBI-ProteinID:
XP_066328653
LinkDB
All DBs
Position
8:complement(218282542..218285856)
Genome browser
AA seq
342 aa
AA seq
DB search
MAGTAAAAPMDIDAAAPPPPPPGAAAKGKAPLSAGGRAAPWVEKYRPQSLADVAAHRDIV
DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIGVVR
QQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVN
KIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNI
LQATHMASQHMTEEAVYLCTGNPMPEDIERIAFWLLNEPFSTSFKYISDMKMRKGLALVD
IIREVTMFVFKIQMPSDVRVKLINDLADIELPEVVILVHTKV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaccgccgccgccgctcccatggacatcgacgccgccgcgccgcctcccccg
ccgcctggtgcggcggccaagggcaaggccccgctctccgccggcggcagggctgcgccc
tgggtcgagaagtaccggccccagtccctcgccgacgtcgccgcccaccgcgacatcgtc
gacaccattgacaggcttacaaacgagaatagacttccacacttgttgctatacgggcca
cctggcactgggaaaacatcgacgattctggctgttgcgaggaagctatatgggtctcag
tatagcaacatgatcctggagctcaatgcatcagatgaacgtggtattggtgttgtcagg
cagcagatccaggattttgctggcgcacgcagcctctcttttggagcaaggccttctgtt
aagttggtcctcttggatgaagcagacgcaatgacaaaagatgcacaatttgcattgcga
agagtcattgagaagtatacaaggagcacaaggtttgcactcatttgcaaccatgtcaac
aaaattatccctgcactacaatcaaggtgcaccaggtttagatttgctccgctagatggc
agtcatgttagagagcgtcttcaacatataataaaatctgaggggctcagtgtagatgag
ggtggcttgacagccctagtgcggttaagcaatggtgatatgaggaaggctttgaatata
ttgcaggcaacacacatggcatcccaacatatgacagaagaagctgtctatctttgcaca
ggaaaccccatgccagaagatattgagcggatagcattttggctattaaatgaaccgttt
tcaaccagcttcaaatatatatctgacatgaagatgagaaaaggattggccttggttgat
atcatacgggaggttactatgtttgtgttcaaaatacaaatgccatctgatgttcgtgta
aagctaatcaatgacttggctgatattgaattgccagaagtagtcattttagttcacaca
aaagtatag
DBGET
integrated database retrieval system
