Miscanthus floridulus: 136475076
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Entry
136475076 CDS
T10264
Name
(RefSeq) autophagy-related protein 18b-like
KO
K17908
autophagy-related protein 18
Organism
mflo Miscanthus floridulus
Pathway
mflo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
136475076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136475076
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136475076
Membrane trafficking [BR:
mflo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
136475076
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
136475076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
PH_BUD3_C
Beta-prop_IFT140_2nd
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
136475076
NCBI-ProteinID:
XP_066328726
LinkDB
All DBs
Position
8:complement(221759153..221762498)
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AA seq
371 aa
AA seq
DB search
MASSSSPSQIICVSFNQDNSMFSVGTKDGFKIFDARNGRLCYEKNLGGFNIVEMLFGTNL
LAIVGTGEQPAMSPRRLCLFNTKTGASKRDLNFKTSILAVRLSRKRLVVVLQDRTFVYDL
NSTTILDEIETVPNTKGLCAFAPNSEECYLALPASTSKGSALVYKASKPELICQIDAHQA
PLAAMVFSLNGLFLATASEKGTMIRVHLVAQATKSHSFRRGTYPSTIYSLTFSPSVDLPD
VLVATSSSGSLHMFFLDASRNARRQANTLLSSVIPGSVTDALDPANHHVIHHVVTADIKS
CLAVHSVENSQNSSKFPALKTVIYIVTHDGYFREYLINTTKSNESSWFLVREFNLLDSCS
GSPKQNEQHID
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagctcgtctccgtcgcagatcatctgcgtctccttcaatcaggacaacagc
atgttttctgtcgggaccaaggatgggttcaagatcttcgacgctcgcaatgggaggctc
tgctatgaaaagaatcttgggggattcaacattgtggaaatgctatttggcacaaaccta
cttgccattgttggaactggtgaacagcctgcaatgtctcctcgtcgtctgtgcttgttc
aataccaaaacaggagcatcaaagcgagatctgaactttaagacttcaattttggctgtg
cgattaagtaggaagaggcttgttgttgtattgcaggataggacttttgtttatgatcta
aatagcactactatattggatgaaattgaaaccgtgcccaatacaaaaggtttatgtgca
tttgctcctaattctgaagagtgttatttggctctccctgcaagcacatccaaaggatct
gctttagtatacaaagcatcaaaaccggaattaatatgccagatagatgctcatcaagct
ccattagctgcaatggttttttcattgaatggtttgttcctggcaactgcttctgaaaag
ggtactatgattagagtgcatcttgtggcacaagcaaccaagtcacatagttttcggcga
ggaacatacccatcaacgatctattcactgacatttagtccatctgttgatctacctgac
gttcttgttgccacaagttcatcaggctctttgcacatgtttttccttgatgcttctagg
aacgcaaggagacaagcaaatacattgctcagttcagtgattcctggatctgtaactgat
gctttggatccagctaatcatcatgttattcaccatgttgtcactgcagacatcaagagc
tgtctggcagtacacagtgttgaaaattcccaaaattcttccaaatttcctgcgttgaag
actgtaatttacattgtaacacatgatggatacttccgagagtatctgatcaacacaacc
aagtcaaatgaatcttcgtggtttttggtgcgtgaatttaatctcctggactcttgttcg
ggtagtcccaagcagaacgagcagcacatagactga
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