Miscanthus floridulus: 136475501
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Entry
136475501 CDS
T10264
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136475501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136475501
03041 Spliceosome [BR:
mflo03041
]
136475501
03032 DNA replication proteins [BR:
mflo03032
]
136475501
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
136475501
Spliceosome [BR:
mflo03041
]
Complex A
U1 snRNP components
Sm proteins
136475501
U2 snRNP components
136475501
Complex B
U1 snRNP components
136475501
U4/U6.U5 tri-snRNP components
136475501
Complex C
U2 snRNP components
136475501
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
136475501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6897
Motif
Other DBs
NCBI-GeneID:
136475501
NCBI-ProteinID:
XP_066329075
LinkDB
All DBs
Position
8:complement(2196151..2209407)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAVGVGRGRAVAMRARAAAGRGGG
PVGRGGAPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcctcgggatcccggtgaagctgctgcacgaggcggcgggccacgtcgtc
acggtcgagctcaagaccggcgaggtctaccgcggctccatggtcgagtgcgaggacaac
tggaactgccagctcgaaaacatcaccttcacggcaaaggacggcaaggtgtcgcagctg
gagcacgtcttcatcagagggagcagggtcaggttcatgatcatacccgacatgctcaag
aacgccccaatgttcaagcgcctcgaggccaggattaggggtaaaggctcagctgttggt
gtcggccgaggccgcgcggttgccatgcgtgctagggctgctgctggtcgtggcggtggt
cctgttggacgaggtggtgcaccccctgtgaggaggtag
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