Miscanthus floridulus: 136475992
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Entry
136475992 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP205-like
KO
K14310
nuclear pore complex protein Nup205
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136475992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136475992
03036 Chromosome and associated proteins [BR:
mflo03036
]
136475992
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136475992
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136475992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Costars
Motif
Other DBs
NCBI-GeneID:
136475992
NCBI-ProteinID:
XP_066329746
LinkDB
All DBs
Position
8:complement(24091876..24114297)
Genome browser
AA seq
1836 aa
AA seq
DB search
MAPLPPRDLLSVIEAALLGSAAPSPAQRVELLHAVRDAAPAFRTLLSYPGPKASDRTQVG
SKEVRLPGMPPITLDDTDVQTALKLSDELNLNEIECVRLLVDANREWVLYGREPLEIYRL
AAGLWYMERRDLITALYILLRSVALDQGLDADLMSEIEEQIQPLFNDGLRQRIIALVKEL
NREEPAGIGRPSSERYVLDFRGALVERRAIVSRERLSLSHCLALSALIKLMSPREVKDVF
SILKDCAAEANQNSSVELQITYGVLFSLVATFISDALSTLEKASLSSADSSFRREFHELV
MRTGNNTTIEGFVGVVRLAWSVHLMLTQDRSNSREMSDIWSCLEIICRQNSFEFLREQVL
KTAAYQNDDEDIVYMYTGYTHKLMMCFISHPTSRDKIKEIKEKAMTALSPYGPPRGHRED
LGRNGEQVDEPTNEPFVSLLELVREIYQKEPELGNGNEELWTFVIYAGEDHTNTQTLVAF
LGLLSTLASTDVGAAKVYELLQGKTYRSVGWSTLFDCLSIYEEKFIKSIQSSANIPPDFP
EGDAQALVAYLAVLQKVVENGNPMERKKWFPDIEPLFKLLSYENVPPYLKGALRNSITAF
IKVSPLLKDAIWNYLEQYDLPVVTAPLGHHTATQVYDMRFELNEVEARRESYPSTISFLR
LINALIVEERNISDKGRRFMGIFKFVYEDVFGPFPQRAYADPLEKWELSLACLEHFRMVL
SMYDIKDDNIYASVNTLAPSSIERQLPLLELLKDFMSGKVAFRNIMNIILVGVDSLTNER
TTQTYGIILEKAVHLSLEIFILVMERDMALADIFRPLYQPLDVILAQSHRQIVALLEFVR
YDYLPQIQQCSIKIMGILSSRIVGLVQLLLKADVGKMVIEDYAACLEFRFDDFQVIEDTK
DDVGVLILQLLVDNICRPAPNITHLLLGFDVNGSIEQTVLKPKSHYSCLKIILDNLEKAT
KPDINALLHEFSFQLLYELCLDPLTCGPVMDLLSTKKYQFFSKHVGTIGVTPLPKRNSNQ
SLRISMLHERAWLLKMLALALHISDISSSVYREACVAILYHTFGQCAENFQSTSLFDSRA
LTSISDVPAKRNKVLDLLEVLQFRCPDTSMKYPQLLSNLGIESKIEEILRNSATFENGGV
YYYSERGDRLIDLDAFHEKLLQMSQELNPQLSESEKAGLKESFHHLLKWAWRYNKNLEEQ
AAQLHMLTGWSQIVEVAVSRRMSLFEDRSQLLFELLDASLNATTSPDCSVKMAYVLTNVS
LTCMAKLRDERFICPAGTDSDAVTCLDIISSKQLPNAACNSLLFKLVMATLRNESSETLR
RRQYALLLSYFQYCSSILESDVPPSVLRFLLLEEQEGDDEDITLQKVLKEHNELAHANFS
IIRKEAQAIIDLVTKDAVHGSEAGKAISFYVLDALISIDHEKYFLNQLQSRGILRSCLSD
VTNYLSKDSSLASESSQRFCTVDAQFSLLLRISHHYGKHGAQILLSMGALQNLSSCNLMG
GQKKGNPRAISKIIKERTGEIDKKRSLITPVLRIVTSFTSLVDSADFLEVKNKIVREIVD
FAKQHQSVFNSILRENMTGANLLTLEQLSMAVSILSKVWAYEENEQCSYIQDLFSLMHSL
FSLDFGSLNFMQSPNMIENHKSELIAFGLCFSLVSYLYVLATKKNMRFQVWYGHNSDQQH
PTLQMVSDLLNSVTLALERVGEEKYMLLNKIRDLNELSRKEVDEIIKVCMKQDCISPNDN
IRKRRYIAMIDLCCMASNRDQLITLLLQITECAVTILLIHFQDDASAKGLSSFSDELLPV
LERLEHLKEDKVGRSLKLFHRSVTTLKEMTIRTMTL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcttccgccgcgcgacctcctctctgtcatcgaggcggcgctgctgggctcc
gcggcgccgtcgccggcgcagcgcgtggagctcctccacgccgtccgcgacgccgccccc
gcgttccgcacgctactctcctatccggggccgaaggcgtctgatcggactcaggtggga
agcaaggaggtgcggctcccaggcatgccgcccatcactcttgatgacacagacgtgcag
actgcgcttaagttaagtgatgaactcaatcttaatgagattgagtgtgttcgtttgcta
gttgatgctaacagagagtgggttttgtatggtcgagagccattggaaatatatagactt
gcagctggcctatggtacatggagagaagggatcttataaccgctctgtacattctgttg
cgatctgttgcacttgaccaaggtcttgatgctgatctgatgtctgaaatcgaggagcaa
atccagcctttatttaatgatggtcttcggcaacggataattgcccttgtaaaggagctg
aaccgggaagaaccagctggaattggccgaccgagctctgagcgttatgtgcttgatttc
agaggggctcttgtggaaagaagggcaattgtctcaagagagagattaagtttgagccac
tgcctcgctctctctgcacttattaaactaatgagccccagagaggttaaggatgtattt
tcaatattgaaagactgtgcagctgaagcaaatcaaaatagtagtgtggagctccagatc
acctatggagttctgttctctcttgtggcaacttttatttctgatgccctaagtactctt
gagaaagcatcattgtcatcggctgattcctcatttagacgcgaatttcatgaacttgtg
atgaggacaggtaacaatacgactattgaagggtttgttggtgttgtgagacttgcatgg
tctgttcatttgatgctaactcaagatcgaagtaattcaagagaaatgtcagatatttgg
tcatgtcttgaaattatctgtcgtcaaaattcttttgagtttttgcgggagcaagttttg
aaaacagctgcataccagaatgatgatgaggacattgtctacatgtacactggctacact
cacaagctaatgatgtgctttatttcccaccctacttctagagataagataaaggaaatt
aaggagaaagcaatgactgccctcagtccatatgggccaccgcggggtcatcgggaagat
cttggtagaaatggggaacaagttgatgagcctactaatgagccttttgtatccctgctg
gaactagttagagaaatctatcagaaagagcctgaactagggaatggaaatgaggaactg
tggacctttgttatatatgcaggagaagaccacaccaacacacaaactcttgtggccttc
cttggacttctcagtactttggcttccaccgacgttggtgctgccaaagtctatgagctt
ctccagggaaaaacttaccgttcagtgggttggagcactttgtttgattgcttatctatc
tatgaggagaagttcataaaatcaattcaatcttctgcaaacataccacctgattttcct
gagggcgatgcacaggcacttgttgcatatttagctgttcttcagaaggtggtggaaaat
gggaatcctatggaacgcaagaagtggttccctgacattgaacctttattcaagcttctc
agctatgaaaatgtgcctccgtacttgaagggggctttgcgaaattcaataactgcattt
atcaaagtgtcacccctactaaaagatgctatttggaattatcttgagcaatatgatctt
ccggtggttacggctccattaggtcaccatacagcaacacaggtctatgatatgaggttt
gagttgaatgaagtagaagcgaggagggagagttacccctcaaccatatctttcctcaga
ttgatcaatgcacttattgtagaagaaagaaatataagtgacaaaggccggaggttcatg
ggtatctttaagtttgtttatgaggatgtctttggtccttttcctcaaagagcttatgct
gaccccctggaaaaatgggagctctcacttgcctgcttggagcatttccgcatggttttg
agcatgtatgacataaaggatgataatatttatgcttctgtgaacacattagctccttcc
tctattgagagacagcttcctctgctagaactactcaaagatttcatgagtgggaaagtt
gctttccggaatattatgaacatcatattagtaggtgttgactctcttaccaatgagcga
actacccaaacatacggtatcattttggagaaagctgtccatctatctcttgaaatattt
attcttgtcatggagagagatatggctcttgctgatatttttcggccactctaccagcca
ttggatgttatattagctcaaagtcatagacagattgtagcattgctagagtttgtacga
tatgattatcttccccaaattcaacagtgttctatcaaaattatgggcatcctgagttct
agaatagttggtttggtacagttgcttttgaaagctgatgttggaaaaatggtaatagaa
gattatgctgcttgcttggagttccggtttgatgattttcaggtcatagaagacacgaaa
gatgatgttggagttctaatactgcagttgcttgttgacaatatttgtcgtccagctcca
aacattacacatttgctcttgggatttgatgtcaatggatccattgagcaaacggttcta
aaaccaaaatcccactacagttgtttgaagataatccttgacaatcttgaaaaagcgaca
aagccagatataaatgccttactgcacgaattcagttttcagcttctctacgagttatgt
cttgatcctttaacttgtgggcctgttatggatctcctgagtacaaagaagtaccagttc
ttttctaagcatgttggaaccatcggagtgacaccgctcccgaaaaggaacagtaaccaa
tctcttcgtatcagcatgctccatgagagggcatggttgctaaagatgttagcactggca
ttacatatatccgatatatcatcatctgtatacagggaagcctgtgtggctattctttat
catacttttggtcagtgtgctgagaacttccagagcacaagtttgttcgattcacgtgct
ttgactagcatcagcgatgtaccagcaaagaggaataaggttttggacttgcttgaggtt
ctacagttcagatgtccggacacttcaatgaagtatccacagctgctttccaacctggga
attgaatcgaagattgaagagatcctaaggaactctgcaacttttgaaaacggtggtgta
tattattattcagagagaggtgatcgactgattgatcttgatgctttccatgaaaaactt
ctccagatgtcacaagaattgaacccacaattaagcgagtctgagaaagccggactaaaa
gaatcatttcatcatttgctgaaatgggcttggcgatataacaaaaatcttgaagagcag
gctgcccagcttcacatgttaactggctggtcacagattgttgaagttgctgtatcaaga
aggatgtcattatttgaggaccgttctcagctattgtttgagctgctagatgcttcattg
aatgccacgacatctccagattgttcagtgaaaatggcatatgttttaacgaatgtatcg
ttgacctgtatggctaaactgcgggatgaaagattcatatgcccagctggtacagattct
gatgcggttacttgccttgacattatttcgtcaaagcagctaccaaatgcagcttgtaac
tcattgctattcaagcttgtgatggcaacgctaagaaatgaatcatctgaaaccttgaga
agacggcaatatgcattactactgagttattttcagtattgtagtagcattcttgagtct
gatgtccctccatctgttcttcggttcttgctactggaggagcaagagggtgatgatgag
gacatcactcttcaaaaggttctcaaggagcacaatgaattagcacatgccaacttttcc
atcataaggaaggaagctcaagctatcattgatttggttactaaggatgctgtccatggt
agtgaagctgggaaagcaatttccttttatgttcttgatgcattaattagtattgaccat
gaaaagtatttcttaaatcaacttcaaagtcgagggattcttagatcatgtctgagtgat
gttacaaactatttgtcaaaggattcgtcattggcatcagaatcttcacagcggttttgc
actgttgatgctcagttttcattactgctgagaataagtcatcattatggcaaacatggc
gctcagattctgttgtccatgggtgctttacaaaatctttcatcatgcaacctcatgggt
gggcagaaaaagggcaatccaagggcaatctccaaaatcataaaagaacggactggtgaa
attgacaagaagaggtcacttattacacctgtactgcgaatagtcacctcttttacatcg
cttgtggactcggctgattttctggaggtgaagaacaagattgtacgagagatagtggac
ttcgcgaagcaacatcagtcggtttttaatagcattttaagggagaacatgactggagct
aatttgctcacattggaacagcttagcatggcggtttctattctcagcaaggtttgggcg
tatgaggaaaatgagcaatgcagctatattcaagatctattttccttgatgcattctctt
tttagcctcgactttgggtctctaaattttatgcaatcaccaaacatgattgagaatcat
aagtcagaattgatagcatttggtctttgcttcagccttgtctcttatctttatgttctg
gctacaaagaagaacatgcgatttcaagtttggtatggccataatagtgatcagcagcac
ccaacactacaaatggtttctgatcttctgaattcagtaacacttgccctggaaagagta
ggtgaagaaaaatatatgctattaaacaagatccgtgacttgaatgagttgtccagaaag
gaggttgatgagataataaaagtatgcatgaagcaagattgcatctctcccaatgataac
atccgtaagaggaggtacattgcaatgatagatttgtgttgcatggctagcaaccgagac
cagcttataacccttctactccaaataacggaatgtgccgttactattctccttattcat
tttcaggacgatgcttctgcaaaaggtctttcttcattttctgatgagctccttcctgtg
ctggagagactagagcatttgaaagaggacaaagttggacgtagtctgaagttgttccac
agatctgttactacacttaaggagatgaccatcagaaccatgaccctatga
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