Miscanthus floridulus: 136476194
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Entry
136476194 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin C-terminal hydrolase 15-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mflo01002
]
136476194
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136476194
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136476194
Peptidases and inhibitors [BR:
mflo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
136476194
Ubiquitin system [BR:
mflo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
136476194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
136476194
NCBI-ProteinID:
XP_066330037
LinkDB
All DBs
Position
8:38178918..38192124
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AA seq
970 aa
AA seq
DB search
MLQPREADLPALFLVFVVLPVIAYFLLGRWHDAASKKARVSMLAQRAAEEAYREETMACP
DIIPPGPSLRTMPYFRPAPSLRQEYHECATCHAPAKTRCSRCKSVRYCSGKCQIVHWRQG
HKETCQKWLGSGSSSFGGSSTEATEQMPFLTNLNSPLPGGEIHLRDMNFDTLSEPSFPTT
DGYNLDTDPFPADRSNMNRSNQGVHISENGAVGVSFEKNNYNAADEIHSPEILSGNKVSN
NYFGSDAMSGNGDATYPAKSNAQQPSSCAPDMRKQSKASITVYQPDMGVYLTSDMVSSCE
GSYASASEPLQRSLSSGRTIGKANVVNKRPPHPSSKVVSAQKSQDRVSTSYQNDGHEKNP
CNKNDQRSTPTCESSQPTSSNLQKFGASKVEVLKKPSKFLKTSLVGLINDNKRNKVLFPY
EDLVKFFQYEARGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSSKNWC
LMCELEQYASTLRESGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLD
GLGGEKHVEPSLQETTFIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQ
DALTQFTAPEDLDGDNMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKC
VTFPDMLDMVPFVTGSGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDS
EVQVVSANQVMSQGAYMLFYLRSFPRPPRIYIEKGLPVTSVKRHASKSSKGSKHERKQTE
LLFSANDQAYGVYDFRPDAKDYTQDQHAELRSRDFHHRDDAFADSVSTDFSEATSSEWSL
FTSSDESSFTTESTRDSFSVVDYGDNAGLDPISSIFGPSYAPEHPPGNFVSCTRFSPSNP
QTRYFSESTGFVSDSSMPAHPSGIVHRGRYPDRACASSAEPLASAHQRSGYGRYPLSRDG
FIQTSGFCQM
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaccaagggaagctgatttgcctgcactctttcttgtcttcgttgtacttccc
gtgatagcttattttcttctcgggagatggcatgacgctgcaagtaagaaggcaagggta
agtatgcttgcacagcgagctgcagaagaagcctatagagaggaaacaatggcgtgccca
gacattattcctccagggccttccttgagaactatgccctatttcagacctgcgccttca
ttaagacaggaataccatgaatgtgcaacttgccatgcccctgcaaagactcgttgctcc
agatgcaagtctgttagatactgctctgggaagtgtcaaatagtacactggaggcaaggg
cataaggaaacatgccaaaaatggcttggtagcggttctagcagctttggtggatctagc
actgaggctactgaacagatgccgttcttgactaacttaaattcacctcttccgggtggt
gaaattcacttgcgtgacatgaacttcgatactttatcagaaccatcctttcccacaact
gatggttacaatctagatactgatccatttccagcagacagaagcaacatgaatagatca
aatcaaggtgttcatatcagtgaaaatggtgctgttggtgtatcttttgaaaagaataat
tataatgctgctgatgaaatccactctccagagattttatctggaaacaaggtgtcaaac
aactattttggttcagatgcaatgagtggtaatggggatgcaacttatcctgccaaaagt
aatgcacagcaacctagcagttgtgctcctgacatgagaaaacagtcaaaagcaagcatt
acagtttaccagcctgacatgggtgtctatttaacttctgacatggtcagttcttgtgag
gggtcatatgcttctgccagtgagccactgcaaaggagcttgtcatctggaagaactatt
gggaaagcaaatgtggtgaataagaggcctccacatccatcaagtaaggtggtttcagca
caaaagtcacaggatagggtgtctacatcatatcaaaatgatggccatgagaagaatcct
tgcaacaaaaatgaccaaagatctacccccacatgtgaatcaagtcaaccaacaagtagc
aatctacaaaagtttggagcatccaaggttgaagttttaaagaagccttcaaaatttctc
aaaaccagccttgtgggattgatcaatgataataagaggaacaaggtattgttcccatat
gaagatcttgtcaagttttttcagtatgaagcacggggtatttcccctagaggtcttttc
aattgtggaaacagctgctatgctaatgctgttcttcaatgtctcatgtgcacaaagcca
ctaatgatctaccttcttctgagactgcattctaaagattgctcttcaaaaaattggtgc
cttatgtgtgaacttgagcaatatgcttcaactttacgtgaaagtggtggacccttatct
ccaagtagaattctttctaatttgaggaatattggatgtcgcttgggtggtgggactcag
gaagatgctcatgagtttttaaggcatcttgtgatgtctatgcaagcagcttgcttggat
gggctgggtggtgagaagcacgttgaaccaagtttgcaggaaacaacatttatacaacag
atgtttggtggccgtcttaaatccaaggttaagtgcctcagatgctatcacgagtctgaa
agatacgagaatataatggatcttactttggagattcatggctgggtagagtccttgcaa
gatgctttgacacagttcactgctcctgaagatttagatggtgataatatgtataaatgt
ggaaggtgttctgcctatgttaaagctaggaagcaactgagtgtgcatgaggtgccaaac
atattaacagttgttcttaaaagatttcagtcaggaaaatatggcaagatcaacaaatgt
gttactttccctgatatgttggacatggttcctttcgtgactggttctggtgacaatccc
cctctttatttcttgtatgccgtggttgtacatgtggatacagaaaatgcatcattctct
gggcactatatatcatacgttaaagatatgcagggcacatggttgagaattgatgattca
gaggtccaggttgtatcagcgaatcaagttatgtcacaaggtgcatatatgcttttctac
ttgaggtcttttccccgaccaccaagaatatacattgagaaggggctgcctgttacatct
gtaaagcgtcacgcttcaaaatcttccaagggctctaaacatgagcgcaagcagacagag
ttactcttttctgcaaatgatcaagcatatggtgtttatgattttagacccgatgcgaag
gactacacgcaagatcagcatgcagagttgagatccagagatttccatcaccgtgatgat
gcctttgcagactcagttagcaccgacttctcggaagctacatcaagtgaatggtcgctg
tttaccagctctgatgagtcgtcatttaccaccgaaagcacaagagattcattcagtgtt
gtggattatggagacaacgctggcctggatccaatttcctctatatttgggccaagttat
gctccggagcaccctcctggcaatttcgtctcatgtacaaggttctcaccttccaatcca
caaacaaggtacttttcagagagcacaggctttgtctcggactcttccatgccggcccac
cctagcggcattgtacatagaggaaggtatccagatagggcgtgcgcctcttcagccgaa
ccgcttgcttcagcgcatcagcggagtgggtatggtcggtatccccttagtcgagatggt
tttattcaaacatctgggttttgccaaatgtaa
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