Miscanthus floridulus: 136476253
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Entry
136476253 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4-like
KO
K10609
cullin 4
Organism
mflo Miscanthus floridulus
Pathway
mflo03420
Nucleotide excision repair
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136476253
09124 Replication and repair
03420 Nucleotide excision repair
136476253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136476253
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136476253
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136476253
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
136476253
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
136476253
TCR (transcription coupled repair) factors
Cul4-CSA complex
136476253
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136476253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
Pox_VLTF3
DUF808
Motif
Other DBs
NCBI-GeneID:
136476253
NCBI-ProteinID:
XP_066330147
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All DBs
Position
1:33818561..33828029
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AA seq
840 aa
AA seq
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MSQPHAAAAASKRLFSSTTTSPSPTSSPATPLMKKTKHPAASSSAAGTVEKNGIHLDTAV
AAAATGGGRTNGEEDAEMVLVDQDELPAPSAPASAGVAANLFRKKATLPQPSTSARKPLR
IKIGQPKLPKNFEENTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYERI
KKECEIHIAEKISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRGIALLLDVKYVKNVAN
ICSVWDMGLQLFRKHLSLSPEIEHKTVTGLLRLIESERLGEAIDRTLLSHLLKMLTALGM
YSESFEKPFLECTSEFYATEGVKYMQQSDIPDYLKHVESRLQEEHERCILYLEANTRKPL
IATTEKQLLERHTSAIIEKGFTMLMDANRINDLSRMYNLFQKVNAVELLKLALSSYIRAT
GQAIIMDEEKDRELVPFLLDFKASLDKILEESFAKNEAFSNTIKDSFEHLINLRQNRPAE
LIAKFLDEKLRAGNKGTSEEELEGILDRVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSA
SIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINDSFRQSSQARTKLLSGIEMSVH
VLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKVDFPKGK
KELAVSLFQSVVLMLFNDAQKLSFLDIKDSTGIEDKELRRTLQSLACGKVRVLQKIPKGR
DVEDKDEFVFNEDFSAPLYRIKVNAIQMKETVEEYTSTTERVFQDRQYQVDAAIVRIMKT
RKVLSHTLLITELYQQLKFPVKPADIKKRIESLIDREYLERDRSNPRSTTIWLDSALADH
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccccacgccgccgctgccgcctcgaagcgcctcttctcgtccaccaccaca
tccccgtccccgacctcctcccctgcgacgccgcttatgaagaagaccaagcaccccgcc
gcctcctcctctgccgcagggaccgtcgagaagaacggcatccaccttgataccgccgtc
gccgccgctgccacgggcgggggccgaacgaacggcgaggaggatgcggagatggtgctc
gtggaccaggacgagctccccgcgcccagcgcgccggcctccgcgggcgttgccgccaac
ctcttccgtaagaaggccacgctcccgcagccgtcgacctccgcccgcaagcccctccgc
atcaaaataggtcaaccaaaactgccaaaaaacttcgaagagaatacatgggcgattttg
aaggatgctatcacagctatttttctcaagcagaaactttcttgtgatgttgagaaactc
tatcaggctgctggtgatctttgtctacacaagctaggggcaaacctatacgaacgaatc
aagaaagaatgtgaaatacacatagctgaaaaaatatcagcattagtaggccaaagccca
gatttggttgtatttttgtctctggtccaaagaacatggcaagatttttgtgatcagatg
ttgattattcgtggtattgctttacttcttgatgtaaaatatgtcaagaatgtagcgaat
atttgttcagtgtgggatatggggctgcaactgttccgcaagcatctatcactgtccccg
gagattgaacacaaaactgtaactggacttctcagattgatcgagagtgagaggcttggt
gaagcaatagataggacattacttagtcatcttctgaagatgcttactgctcttggaatg
tattctgagagttttgaaaagccctttcttgaatgcacttcagaattttatgctacggaa
ggtgttaaatatatgcagcaatctgatattccagactacctgaagcatgtggagtcgagg
ttacaagaagaacatgaaaggtgtattctatatttggaagctaacacaaggaagccactg
atcgcaactactgaaaagcaattgctagaacgtcatacatctgcaattattgagaagggg
ttcactatgctcatggatgcaaatcgtataaatgacctctcgaggatgtacaaccttttc
cagaaggttaatgctgttgagctgctaaaactagcgcttagttcatatatccgggctaca
ggccaggccattattatggatgaggaaaaggacagagaattagttccatttcttctcgat
tttaaggcatcactcgacaaaatattggaagaaagttttgccaagaatgaggctttctcc
aataccataaaagattcatttgagcaccttatcaatctaagacagaaccgacctgcggaa
ttgattgcaaagtttcttgatgagaaacttcgagctggcaataaagggacatcagaagaa
gagctggagggtatacttgatagagttttggtcctgtttcggtttatacaaggtaaagat
gtatttgaggcattctacaagaaggatctagctaagaggttgctgcttgggaagagcgca
tcaatagatgctgaaaaatcgatgatcacaaaactcaaaactgagtgtggaagtcagttt
accaacaagctggagggaatgttcaaggacattgaattatccaaagaaataaatgattca
ttcaggcaatcatctcaagctaggacaaagcttctctctggcattgaaatgagtgtccat
gtgcttacaacaggctattggcctacatatccaccaatggacgtgaaactcccacacgaa
ctgaatgtgtatcaggatatatttaaagagttctatttgagcaagtacagtggaaggcgt
ttaatgtggcagaattctttgggacactgtgtcttgaaagtggactttcccaaaggcaaa
aaggaactcgcagtgtcattgtttcagagtgtggttttgatgttgttcaatgacgcacaa
aaattaagcttccttgacatcaaagattccactggtatcgaggataaagaattgagacgg
acactgcaatcacttgcatgtggtaaagttcgggttctccaaaagataccaaaagggaga
gatgtagaagataaggatgaatttgtattcaatgaagattttagtgctcccctctatcgc
ataaaggtaaatgcaattcaaatgaaggagacggtagaagaatacacgagcaccactgag
agagtgttccaggatcggcagtatcaggttgatgcggccatagttcgaataatgaagacg
cggaaggtcctcagccacacccttctaataacggagctttaccagcagctcaagttccct
gttaagccagctgatatcaagaaaagaatagagagcttgatcgaccgggagtacctggag
cgggacaggagtaaccccagatctacaactatctggcttgacagcgctttggcggaccat
taa
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