Miscanthus floridulus: 136476347
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Entry
136476347 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136476347
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
136476347
TFIIIC, fungi type
136476347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_8
TPR_2
TPR_1
TPR_7
TPR_16
TPR_12
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
TPR_11
TPR_Slam
Alkyl_sulf_dimr
ARM_TT21_2nd
TPR_EMC2
SNAP
Motif
Other DBs
NCBI-GeneID:
136476347
NCBI-ProteinID:
XP_066330236
LinkDB
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Position
8:50281088..50297460
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AA seq
915 aa
AA seq
DB search
MSAVTEDGDQRASASEAGDRGRDGDEDFDEDEEDGFEFGDADEAMHCVEMAESSTTAAKL
RAHSQDYEALAARKRKTLAEEQPQREEGSKRPRQDQLSEAEAATMFDQLMEGFGLRRKRR
SKDGKKRGRKKGTKNKGSAEVIKKLGDATLLFAEEKFNEAIPILHEIVRIAPNLSDSYYL
LGSIYSEIGELDKAINFLMLAAYVSPKDASLWKKLIPLAKKKGDASLARHCILKAMRADP
EDVDLKYLCGDMYRNICDYQKAAEIYEQIVRIYPANIAVRKVAAQMYRECGQIDKAINLL
EDYANTQTSNIDWSVLDLLISLYIRNNVLSEALRQIKRAQLQLGSQQNLPVQLQAKEVIC
HAYCGDMKYAEIFLHDVHLEPSKENIDVIKELASTLEKMGQYEYAVKFYLLIENVATHND
GGLYFDIKEMGSSYVNVAQCYMVLGDKKNAIPYFYKALRSMKDNIDIRLTLSSLLVDDDK
TDEAATLLSPPKIPELQSANTPDQRKPWWCDGKVKMQLAKIYYNKGKLEDFVDTIFHPIL
ETLNVEYANRKVRPMKKLPNTVLHERVKVLGEQRPDSVFQGLKPIASPDELIKANRAKKI
IEKRAAANELKPDDPPRTKQVPPVPGILTNVEHHQLVLNVCICQLCRTLALLQRYWDALQ
IINRTLKLGNDALTGDKKEELRSLGAQIAYRAPDPSHGFKYVRYVVQQHPYSLAAWNSYY
KVISRIEDRFPQHFKHLLRTREAKPDCVPPIIISGHRFTAISQHQSAARDYLEAYKLDPE
NPLINLCVGTALISLTLGFRLQNKNQCIVQAFAFLYRYLRLCDNSQEALYNIARAYHHIG
LNTLAAIYYEKALAIEEKDHPIPKLPYEAGSCVPEDLKPGYCDVRREAAFNLHLIYKKSG
ATDLARRILKTYCTV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtaacggaggacggcgaccagcgagcttccgcctctgaggcgggggaccgc
gggcgcgacggggatgaggatttcgacgaggatgaggaggacgggttcgagtttggtgac
gccgacgaggcgatgcactgcgtggagatggcggagagtagcaccaccgccgcgaagctg
cgtgcccactcgcaggactacgaggcgctagctgcgcgcaagcgcaagacccttgccgag
gagcaaccccagagggaggagggttccaaaaggccaagacaggatcaactttcagaagcg
gaagcagcaaccatgttcgaccaactgatggaaggctttggtcttcggcgcaaaagaagg
tccaaagatggcaagaaaaggggaagaaagaaaggaacaaagaataagggcagcgctgaa
gttattaaaaagttgggtgatgctactctacttttcgctgaagaaaaatttaacgaggca
attcctatactacatgagattgtgcgaattgcgccaaatttgtcagattcatattatcta
cttggtagcatttatagtgagattggtgaactagataaagccataaacttcttgatgctt
gctgcatatgtttccccaaaagatgcatctctgtggaagaaactcattcccttggcaaag
aaaaaaggggatgcttctctggcaagacactgtattttaaaagcaatgagagcagatcca
gaagatgtagatctgaagtatctttgtggtgatatgtatcgcaatatttgtgactatcag
aaagctgcagaaatatatgaacagatagtcagaatttatcctgccaatattgctgttcgt
aaagtagcagcacagatgtacagagagtgtggtcaaattgacaaagctattaatttgttg
gaagactatgccaatactcaaacttccaacattgactggagtgttctagatttattgata
tcactttatataagaaataatgttcttagtgaagcactaaggcagatcaagagggcacag
ctacaattgggatctcaacagaatctaccagtacaattgcaggcaaaagaagtaatctgc
catgcatattgcggtgacatgaaatatgctgagattttccttcatgatgtgcatttggag
ccatcgaaagaaaacattgatgtgattaaggaacttgcaagcactttagaaaaaatggga
caatatgagtatgcagtaaagttttacctgctgattgaaaatgttgctactcataatgat
ggtggtttatactttgatatcaaagaaatgggtagttcatatgtcaatgttgctcagtgc
tacatggtcttaggggacaaaaaaaatgctattccttatttttataaagccttacgaagc
atgaaggacaatatcgatatacgattgaccttatcgtcccttcttgttgacgacgacaag
acagatgaagctgccactttgctttctcctcccaaaattccagagttgcagtctgctaat
actccagaccaacggaaaccttggtggtgtgatgggaaagtaaagatgcagcttgcaaaa
atttattacaataaaggcaagctggaagattttgtggacacaatttttcatcctattcta
gaaactttgaatgttgaatatgctaatcgaaaggtcaggccaatgaaaaagcttccaaac
actgttctgcatgaaagagtcaaagtattgggtgagcaacgcccagatagtgtatttcaa
ggattaaagccaatagcatcacctgatgaattaataaaggcaaacagagcaaagaaaata
attgagaaaagggcagctgcaaatgagttaaaacctgatgatccgccaagaacaaagcaa
gttcctcctgttcctggtatactgacaaatgtggagcatcatcagcttgtgttaaatgtt
tgtatctgccagctttgtcgaacattagctttgctgcagcgatattgggatgcactgcag
attatcaaccgaactctcaaacttggaaatgacgcactcactggtgacaaaaaagaggaa
ctcagatccttgggtgctcaaattgcttatagagctccagatcccagtcatggctttaag
tatgtccgttatgttgttcagcagcacccatattctcttgctgcatggaattcctactat
aaggtgatatcaagaatagaggacaggtttccacagcatttcaaacatcttctacggaca
agagaagcgaagcctgactgtgtgcctccaataatcatatctgggcatcgatttactgct
ataagtcagcatcagtcagctgctcgggattacctggaagcttataagttggacccagaa
aaccctcttattaatctttgtgtaggcactgccttgattagtttgacccttggcttcagg
cttcagaataagaaccagtgcattgtccaagcttttgctttcctgtacagataccttcgc
ctttgtgataacagtcaggaagccttgtacaacattgctcgggcatatcaccacattggc
ctgaataccttggcagctatttactacgagaaggctttggcgatcgaggagaaagatcat
cccatccctaaacttccatatgaggctggttcatgtgtgccagaggatctgaagccaggg
tactgtgacgtgcgtagagaagcagcgttcaatctgcatctaatctataagaaaagtgga
gctaccgatcttgcaagacggattctgaaaacttactgcactgtctag
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