Miscanthus floridulus: 136476477
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Entry
136476477 CDS
T10264
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136476477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mflo02000
]
136476477
04147 Exosome [BR:
mflo04147
]
136476477
04090 CD molecules [BR:
mflo04090
]
136476477
Enzymes [BR:
mflo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
136476477
Transporters [BR:
mflo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
136476477
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136476477
CD molecules [BR:
mflo04090
]
Proteins
136476477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
RsgA_GTPase
AAA_29
Zeta_toxin
AAA_25
AAA_15
PRK
Rad17
nSTAND1
AAA_28
Motif
Other DBs
NCBI-GeneID:
136476477
NCBI-ProteinID:
XP_066330432
LinkDB
All DBs
Position
8:59731665..59737832
Genome browser
AA seq
1259 aa
AA seq
DB search
MSMNYEDHSMSSSHADDTDERKSTVSVSPEAGADEEPFSFFELLCYADTVDWLLMALGTI
GSVIHGMAFPVGYLLLGKALDAFGTNINDPEVMVHALYKVIPFVWYMAGATLPAGMVEIS
CWIYSSERQLARMRLAFLRSVLNQEVGAFDTDLTTATIITGVTNYMSVIQDAIGEKLGHF
IASFSTFFAGIIIAFISCWQVAMLSFLVIPLILVIGAAYTKKLNVLSLSRNAIVSEAISV
VEQTLSHIKTVFSFIGESWALKSFVQCMENQFNLSKKEALINGIGLGMFQAVTFCSWALM
VWIGAVAVTKNKATGGGTIAAIMSILFGAISITYAAPDLQTFNQAKAAGKEVFKVIKRKP
SISYGKSGLVLDKIHGEIKFRRVHFAYPSRQDKPILQGFSLSIPAGKVIALVGSSGCGKS
TVISLLQRFYDPTSGDIFIDGHSIKKLDLKSLRRNIASVSQEPSLFSGNIKDNLKIGKMD
ASDEEITEAATTANVHSFISKLPNEYLTEVGERGVQLSGGQKQRIAIARAMLKDPPILLL
DEATSALDSESEKLVQDALERAMRGRTVILIAHRMSTIVNADTIVVVENGRVAQTGTHHE
LLDKSTFYSNVCSMQNIDKEAENKVASASDNMEEQIGEAHIKQSSTNQGPKKKLERLESK
QPRNENVKETHPFFRLWYGLRKEDIVKILFGSAAAAISGISKPLFGYFIMTIGVAYYDPD
AEKKVTKYSLIFFTAGMVTMVSNILQHYIYGIIGERAMKNLREALFSAVLRNELGWFEKP
NNGVGFLTSRIVSDTSTVKTIISDRMAVIVQCISSILIATIVSMKVNWRMALVSWAVMPC
HFIGGLIQAKSAKGFYGDSAIAHRELVSLASEAASNIRTVASFVYEDEIIKKAELSLQEP
LKITKIESMKYGVIQGISLCLWNIAHAVALWYTTVLVQRKQASFKDSIRSYQIFSLTVPS
ITELWTLIPMVMSAISILNPVFDTLDRETQIVPDKPENPGKGWLIGRTEFQDVSFNYPSR
PEVTILDGFNLVIEPGQRAALVGPSGAGKSSVLALILRFYDPSRGRVLIDNKNIKDYNLR
WLRKQIGLVQQEPILFNTSIRDNISYGSESSSETEIIQAAMEANIHEFISGLPEGYGTVV
GDKGSQLSGGQKQRIAIARTILKRPAILLLDEATSALDGESERVVMSSLGAKVWKDKDEQ
ASMITSITVAHRLSTVINADTIVVMEKGKVVELGNHQALISAEDGVYSRLFHLQSNMKD
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaactatgaagatcactcaatgtcatcatctcatgctgatgataccgatgaa
aggaaaagcacagtttcagtctcccccgaggctggcgccgacgaggagccattttcattc
tttgagctgctttgctacgccgacacagtagattggctcctcatggccctgggaaccatt
gggtctgtcatccatggcatggcattcccagttggatatctccttcttggaaaggcactt
gatgcctttggaaccaacataaatgatccggaggtcatggtccatgcgctgtacaaggtg
atcccctttgtgtggtacatggcaggagccactcttccagctggaatggttgagatctcc
tgctggatatactcaagtgagagacagttagcacgcatgcggctcgcgtttctgagatca
gtccttaatcaagaggttggggccttcgacactgacttgactactgcaaccatcatcacc
ggagtaaccaactacatgagtgtcatacaagatgcaataggagagaagctgggtcatttc
attgcaagcttctccactttctttgctggcatcataattgcgtttatcagctgctggcaa
gttgcaatgctttccttcctggtcattccacttatcctcgtcattggagcagcatacacg
aaaaagttgaatgtcttatctttgtcacgcaatgctattgtttcagaggcaatatcggtt
gtagagcagactttgtcacatatcaagaccgtcttctccttcattggagagagctgggcc
ctgaagtcctttgtccagtgcatggaaaaccaatttaatctaagcaagaaggaagcattg
ataaatggaataggacttggaatgttccaagcagtgaccttttgttcatgggcactgatg
gtttggattggggcagttgcagtaaccaaaaacaaggcaacaggaggtggcacgatagct
gccatcatgagcatcctctttggtgcaatatcaattacctatgccgcaccagaccttcag
accttcaatcaggcaaaagctgcaggaaaagaggtcttcaaggtgataaagagaaagcca
tccataagttatggaaaaagtggattagtactagacaagattcatggagagatcaaattc
cgtagggtgcactttgcatatccttcccgccaggataagccgattctccagggattctca
ttatccatccccgcaggcaaagtcatagctctggtaggaagcagtggctgtgggaagagc
actgtcatttcactacttcaaaggttttatgatccaacttcaggtgacatattcattgat
ggccacagtatcaagaaacttgatctgaaatcgctgcgcagaaatatagcttcagtctct
caggaaccatcactgttttctggtaacataaaggacaacttgaagattggtaaaatggat
gcaagtgacgaagagataactgaagcagcaacaacagctaatgttcattcattcatatcc
aaactaccaaatgagtacttaaccgaggtaggagaaaggggtgtgcagttatcgggaggc
cagaaacaaagaatagctattgcaagggcaatgctgaaggatccaccaatcctacttctc
gacgaagcaacaagtgcccttgattcagaatcagagaagctagttcaagatgcacttgag
agagcaatgcgcggaaggactgttatcttgatagcccacaggatgtccacaattgtaaac
gctgacactattgttgtcgtcgaaaatggaagagtagcacaaactgggacacatcatgag
ttgcttgacaaaagcacattctactccaatgtatgcagcatgcaaaatatagacaaggaa
gctgaaaataaagtggcaagcgcttctgataacatggaggaacaaattggcgaagcacac
atcaagcagtcctctacaaatcagggaccaaagaaaaagctagaaagactggagtcaaaa
caaccaaggaatgagaatgttaaggaaacacaccctttctttagactttggtatggattg
cgtaaagaggacattgtgaagattctatttggctccgcagcagcagccatctctggaatc
tcaaagcctttgtttggttatttcatcatgaccattggtgtggcatattatgatccggat
gcagaaaagaaagtcaccaagtattctttgatattcttcacagcagggatggtaacaatg
gtgagtaacatcttgcagcactatatttatggtatcattggagaaagggcaatgaaaaac
ctaagggaggcactcttttcagctgttctccgaaatgagcttggttggtttgagaaacca
aataatggcgtaggatttcttacctcacgcattgtcagtgacacgtcaacagtcaagacc
atcatatctgacagaatggcagttattgtgcaatgcatctcttcaattctgatagcaaca
atagtaagcatgaaggtcaattggagaatggctttagtttcatgggcagtcatgccatgc
catttcattggtggccttattcaagccaagtcagcaaaaggattttatggtgactctgct
attgctcaccgggaacttgtctccctagcttcagaggctgctagcaacatccggactgtg
gcatcctttgtttatgaagatgaaataatcaagaaagcagaattgtcactgcaagaaccc
ttgaagatcaccaagattgagagcatgaagtatggggtcatccaaggtatctcgctctgc
ctctggaatattgcacatgcagtggcgctatggtacaccacagttttggttcagaggaag
caagcctcatttaaggacagcataagatcataccagatattctcactcacagtgccttcc
atcacagagttatggaccctcattcctatggtcatgtcagccatttcaatactgaatcct
gtatttgacacacttgacagagagacacaaattgtgccggataaaccagaaaacccaggc
aaagggtggcttatcggtagaaccgagtttcaggatgtgagcttcaattatccatcaaga
ccagaggtgaccattctggatggcttcaatctagttattgaacctggccaaagagcagca
ttggttggccccagtggtgcaggaaagtcctctgtactggctttaatactgagattctac
gatccttccagaggtagagtgttaattgacaacaagaacataaaggactacaatctccga
tggctcaggaagcagattgggctagttcaacaagaaccaatcctgttcaacacatccatc
agagataacattagctatggaagtgaaagctcttcagagactgaaatcatccaggctgca
atggaggcaaacattcacgaattcatcagtggtctaccagaagggtatggcactgttgtt
ggagacaaagggagccagctttcaggagggcagaaacagaggattgctattgcaagaaca
atactaaagaggcctgccattctgcttcttgatgaggcaaccagcgcacttgacggtgaa
tctgagagggtggttatgagctctttaggggccaaagtgtggaaggacaaagatgagcaa
gccagtatgattacaagtatcacagttgcacacagattgtccacggtcataaatgcagat
acgatagttgtgatggaaaaaggaaaggttgttgaacttggtaatcaccaagcgttgatc
tccgctgaagatggcgtttactcaagattattccacttgcaaagcaacatgaaagattga
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integrated database retrieval system
