Miscanthus floridulus: 136476597
Help
Entry
136476597 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136476597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136476597
Spliceosome [BR:
mflo03041
]
Complex A
Other components
Complex A specific factors
136476597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
Motif
Other DBs
NCBI-GeneID:
136476597
NCBI-ProteinID:
XP_066330592
LinkDB
All DBs
Position
8:complement(67608981..67615804)
Genome browser
AA seq
762 aa
AA seq
DB search
MTTKLDHSSAEHRQAKSTAPSSLTPKISMFGAKAGFVIPKNKLAGSLVIRSTSAKNETPA
ASSEDSSRHVQRKTKWAPDLALDPVVCKGRVLAYQTRVEQITKQLKSGTLDTSEIDGSVS
AGNDLNSIGSDILKENELGNVELLELERRELIGEILRLNPGYKTPENYKPVLKETKVPLP
AEAHPGHNIIGVLLGPESSTQKRLHEETGAVIRVYGTKKINGEKSEIRHQDINEAQDAYE
DLYINVSADSYDKVDAAVVLIELLLAPVSVKSTATSTTTAVPSAVTSKDAVSANVQLVQN
TTSQPDLLHYQSHNPPWLPTPQTNAPSIPSTGPVLSTLPNNSLQPQPPAGSFSMPPYTGQ
PPHMNSMPRNPFPVPGPQQSTPSNQQHPPQFRANNSSIGPSFGQPPGIVSPHMTPSSSMP
PPVRSLQIPHPSCGWPPFSPVTPQSQRPLQASPIFMAMRPPISVSPVGATPTQGPIALIP
SNMPTMYRSQHPPVPNFTGSAPLVSRPPGGAQSFPTAAPQGPSSVAFTGGASLQSPYPPT
PDQMRGPPPAFSPVGSTPGMVPPSIASSGAPAPGPANTSGSQAQIAPLRPPLPVTGDFTF
RPVVSPVPTPDFAASNHQMGIQDRTHPGPFFHHSNQNPNQGFQRPFDGRPMNMMGQAQMH
PPPPHFHGAFPRNPSPLEFTAGFRGFRPAVQAPQMPAPSNPSSFLPSRPFQLRPPXPQQD
MSGAGGNRPGGNQIYNPFAPTAAQRTEADPEYEDLMASVGVK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaaacttgaccattcttctgcggagcatcgccaagcaaaatccacagcgcca
tcgtctttgacccccaagatctcaatgtttggggcaaaagctggattcgttatacctaag
aacaagctagccggctcactcgtaatccggagcaccagtgctaagaatgaaacgccagct
gcatccagcgaagatagcagcagacatgttcagagaaagacaaagtgggcgcctgacctc
gctttggaccccgtcgtgtgcaaaggaagggttttggcttaccagactcgagtggagcaa
attaccaagcagctgaagtctggaactttggatacgtccgaaattgatggttcagtgtct
gctggaaatgatttgaattctattggttctgacatcttgaaagagaacgagctgggaaat
gttgaactattagaacttgaaagacgagaacttattggtgaaatactccgtttaaatcca
ggatataagacgcctgagaactacaaaccagtacttaaggagacaaaagtccctcttccg
gcagaagcacatccaggacataatattattggagttcttctaggacctgaaagcagtacc
cagaagcgactacatgaagaaactggagctgtcattcgagtatatgggactaagaaaatc
aatggagaaaagagtgagattcgtcatcaagacataaatgaagcacaagatgcttatgaa
gacctatacatcaatgtatcggctgactcttatgataaagtagatgctgcagttgtgttg
attgagctgcttcttgctcctgtttccgtaaagtcaacagctacttcaacaactactgct
gttccttcagcagttacctccaaggatgcagtttcagcaaatgtgcaactggtgcagaat
accacttcacagccagatttacttcattaccaatcacacaatcctccttggctgcccaca
ccccagaccaatgctccatcaataccttctacggggcctgttttgagtacattacctaac
aattcattgcagccacaaccgcctgctggttctttcagtatgcctccatatacaggtcaa
cctcctcacatgaatagcatgccaagaaatccatttcctgttcctgggcctcagcaatca
acaccaagcaatcaacaacatccacctcaatttcgagctaataactcctcaattgggcct
tcttttggtcaaccgcctggtattgtaagcccacacatgacaccatcttcctcaatgcca
ccgccagttagatctcttcaaataccccatccatcttgtggttggccacctttttctcct
gttacgccgcaatctcagaggcctttgcaagcttcaccaatttttatggcaatgagacct
cctatttctgtctctcctgttggtgcaactccaacacaaggtcccattgcattgatacca
tcaaatatgcccaccatgtatcgcagccagcatccaccagtaccaaatttcactggttca
gcaccattggtttccaggcctcctggcggagctcaatcttttcctacagctgcgcctcaa
ggtccttcctcagtagcatttactggtggggcatcactgcagtcaccttaccctccgaca
cctgatcaaatgagagggccacctccagctttctctccagttggatcaactcctggcatg
gtgcctccatcaattgcatcttccggcgcgcctgccccaggtcctgcaaacacaagcggc
agtcaggcacaaatagcccctttgagacctccactcccagtcacgggcgattttactttt
cggcctgtcgtatcaccagtacctactccagactttgcagcatcaaaccatcaaatggga
atacaagacagaactcaccctggaccattcttccatcatagtaaccagaaccccaatcaa
ggtttccaaaggccttttgatggcaggcccatgaatatgatgggtcaggctcagatgcat
cctccacctccacacttccatggagccttccccaggaatccatctcctctcgagttcact
gcggggttccgggggttccggccagcagtacaagcacctcagatgccagcgccatcaaat
ccatcgagtttcctgccttcccggccatttcagttgaggccaccanngccacaacaggat
atgtctggtgcaggtggaaacaggccgggtggcaatcaaatctacaacccttttgcacca
acggcagctcagaggacagaggctgaccctgagtatgaggatctcatggcatcagttggc
gtgaagtaa
DBGET
integrated database retrieval system
