Miscanthus floridulus: 136476705
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Entry
136476705 CDS
T10264
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136476705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136476705
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136476705
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
136476705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
136476705
NCBI-ProteinID:
XP_066330735
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All DBs
Position
8:complement(75089519..75094525)
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AA seq
881 aa
AA seq
DB search
MADAAIAPFLPGEAEGDDEDACRICHLPAEAGRPLRHPCACRGSIRFVHDDCLLRWLSSR
RGFSSASSSPRCEVCKRPISIAPIYAANAPIRLPLPEFMLGLANKLMSWLLLLLSLLFAI
CVWEFIMPLTTLWVWRLALSRTSAQVRRLLSLRTSALFRPYAMRFMPSTDTVLACVSIRR
AFLRELPNLRQLNAPARVAADALAPLALWVARLEAHLQHRFGGLDTLQVLALHTVEAALM
VVIGDVAFAFLLGFLPFSLGRILLCCMSCFTSGTLDITHSSTSTTSVLLVGYGLILVAAL
LSTALHTFQQYSRGEQLTITVYFDALTDLVCWLFSPLKMLPSIHVMLGRTGTFLQHFFRG
IISLANISLNLTVILVIWPLLFGWSLDIYTSKLFGVEIPQKLQLLFASSFASTALHWLIG
CICLLLHSLLPSLLRPALRLGTPFVHTTGGKIKIGEPFCKFFFKIVPGLFLSLIYVAMVI
LVPVEIAFRLVPTMFPLDITYFDPPTGTVLWQPTRNYAELLSGFLLLKLLICNALEYLEP
ILLVKKVLRYWFASTGQALGLSDLLTAQPDGAGESEAGNSVTPKDQYGRPAEAKDKRRSL
AVRLALLMVPAWLTVVMFIAALLVAPVSAGRALLFAIPQLPVAGALKSNDIFAFAVGFCV
LSTIIAASRDVFAYVTSGRTRLLSSIICSRVITALKSAPLLFLWVVVIPFLIGLLVDCLL
ILPFVVPTDEVPVFDFFCTWFLGSQLLKFWTKLVGWTRVAPFLACFIDERWDRKLTQARE
DGFSGLRALWVLRDVLMPITVKLLSALCVPYVLAKGVAPRFGYSADVNSVVLRFAWLGSL
AMCALCYLAKVLSRFVVRLHDSIRDERYLIGQRLQNYVDNM
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcggcgatcgcccctttcctgcccggcgaagcggaaggcgacgacgaggac
gcgtgccgcatctgccacctcccggcagaggcgggccggcccctgcgccacccctgcgcc
tgccgcggaagcatcaggttcgtccacgacgactgcctgctccgatggctgtcctcgcga
cgtggcttcagctcggcatcgtcatcacccagatgcgaggtgtgcaagcgccccatctcc
atcgcccccatctacgccgcaaacgctcccatcaggctgcccctccccgagttcatgctt
ggcctcgccaacaagctcatgtcctggctgctcctgctcctctccctcctcttcgccatc
tgcgtctgggagttcatcatgccgctcaccaccctctgggtctggcgcctcgccctctcc
aggacctccgcacaagtgcgccgcctcctctccctccgcacctccgccttattcaggccc
tacgccatgaggttcatgccctcgacggacactgtccttgcctgcgtctccatcagaaga
gccttcctcagagagctccccaaccttaggcagctcaacgcccctgccagagtcgctgct
gatgcccttgctccccttgcgctctgggtggcgcgcctcgaagctcacctgcagcaccgc
tttggaggcttggatactttgcaggtccttgcgctacacaccgtcgaagcagccctgatg
gtggtaataggtgatgtggcatttgcttttctgcttgggtttctccccttctcactggga
aggatactattatgctgcatgtcgtgtttcacctctggcactctggatataacacactcc
tccacttcaacaacatcagtgcttttagttggatatgggcttatccttgtggcggctctg
ctctctactgccttgcatactttccagcaatactctaggggcgagcaacttaccatcaca
gtttatttcgatgccttaaccgacttggtgtgctggctatttagccctcttaagatgctg
cctagcatacatgtaatgctcggtaggacaggcactttcttgcagcacttcttcaggggg
atcataagtttagcaaatatttctcttaatctcacagtgattcttgtaatatggcctttg
ctctttggctggtcgcttgatatctacacttcaaaattgtttggtgtggaaataccccag
aagctccaacttctatttgcttcatcatttgcttctactgctcttcactggcttattgga
tgtatctgtttgctgctgcactcattacttcccagtcttcttcgcccggcattgaggcta
ggtaccccttttgtccacactactggaggcaaaatcaagattggggaaccattctgcaag
ttctttttcaagattgttcccggtctttttctcagccttatctatgttgcgatggtcatt
cttgtccctgttgaaattgctttccgtttggtacctaccatgttcccgctagacatcacc
tactttgatcctccaacgggcacagtactttggcaaccaacacgaaactatgcagagtta
ctatctggttttcttcttctgaagcttctaatctgcaatgcactcgaataccttgagcct
attctgcttgtgaagaaggtactgcggtattggtttgccagtaccggacaggctcttggt
ttgtctgatttattgactgcccaacctgatggtgctggtgaatctgaagctgggaatagt
gtcacaccaaaagatcagtatggtaggcctgctgaggctaaggataaaaggagatctctt
gctgttcgattggcactactcatggtgccagcgtggcttactgttgtcatgttcattgct
gctctacttgttgctccagtctcagctggacgtgcattgttgtttgccatccctcagttg
ccagtagcaggtgctttgaagtccaatgatatttttgcttttgctgtcggattctgcgtc
ttgtcgactattattgctgcctctagagatgtctttgcttatgtgacctctgggagaaca
cgccttctgtcgtctataatctgcagtcgggttataactgctttgaagagtgctccgctt
ttgttcctatgggttgtcgtcattccctttctaatcggattgttggttgattgtctactg
atattacccttcgtggtgcccactgatgaagttccagttttcgatttcttctgcacttgg
ttcttggggtcgcaattgctgaaattctggactaagttggttggttggacaagggtcgca
cctttcctggcctgtttcatcgacgaaaggtgggatcggaagctaactcaggcaagggag
gatgggttttcagggctcagggcattgtgggtcttgcgagatgttttgatgccaatcact
gtcaagctactgtctgctctctgtgttccttacgtgcttgcaaaaggcgtggcaccaaga
ttcggctactccgctgacgtgaactctgtagtgcttcgttttgcatggctgggcagcctt
gccatgtgtgcgctctgttatctagctaaggtactctccaggtttgttgtcagactccat
gattctatcagggatgagcgctatctcatcgggcagaggttgcagaactacgtggacaat
atgtag
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