Miscanthus floridulus: 136476829
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Entry
136476829 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136476829
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136476829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136476829
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
136476829
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
136476829
NCBI-ProteinID:
XP_066330883
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Position
8:complement(81808975..81813365)
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AA seq
600 aa
AA seq
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MDPDGDPAFHRNEAISAVQDVDQYYGDDDDFDDLYNDVNVGDGFLHASHQAPPPPPPNQQ
APPPQQQQLPPPPQQPPQQQLHPPAHALPPPPPQVPPPQQQVRIPGVAVPSPGIPPAQNN
LPPPPQPPAAPAPPPPQHHQIQQGDGINRPGGNFAGGPIVVGNGGPAGGGDGPGGTTLFV
GELHWWTTDADLESELSKYGPVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKEGMNGH
AFYGRPCIVAFATPNSVRRMGEAQVKNQQAMAAQTSNMQPKGGRGGGGAAGPQVGGNYGG
GRGGAVGPGAGGGAGGGGGNWGRGGGGMGNRGPVGNMRNRMGPAGGGRGIMGNGGMVAPP
PPMMPPGGMLGQGFDPAGYGAMGRMGGGFGGFPGGPGAMPFPGLMQPFPPVVAPHVNPAF
FGRGGMGAGGMWPDPNMGAWGGEEQSSYGDDTASDQQYGEGGSHGKERPPEREWSGAPER
RREREKDAPPAQEWPERRHRDERDMDRERNRDYDRDRERDRDRERDRDRDRERDRDRERE
RERERERESHRDDRDRYGDYHRHRDRDSERNEGWDRGRSSGIRSRSREADHSKRRRMTPQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacggcgacccggcgttccaccgcaacgaggccatctccgcggtccaggac
gtcgaccagtactacggcgacgacgacgacttcgacgacctctacaatgacgtcaacgtc
ggggacggcttcctccacgcctcacaccaggcgccgccgccgccgcctccgaatcagcag
gcccctccgccgcagcagcaacagctccctccgccgccccagcagccaccgcagcagcag
ctgcatccgccggcccacgccctcccgccaccgccgccgcaggtcccaccgccgcagcag
caggtacgcatcccaggggtggccgtcccttctcctggcatacctcccgcccagaacaac
ctccctccgccgcctcagccgccggccgcgcccgcgccgccgccgcctcagcaccaccag
attcagcaaggagatgggatcaaccgccctggagggaacttcgccggcggccccatcgtg
gtcgggaacggtggccctgctggtgggggtgacggccctggcggcacgacgctgttcgtg
ggggaactccactggtggacgacggacgcggatctggaatctgagctcagcaagtatggt
ccggtcaaggaggtgaggttcttcgacgagaaagccagtggcaagtccaagggctactgc
caggtcgatttctatgaccctggtgcagctgctgcctgcaaggagggcatgaacgggcac
gccttttatggccgtccatgtattgtggcattcgccacaccgaactccgttcgtcgcatg
ggcgaggcgcaggtgaagaaccagcaggccatggctgcgcagacatcgaatatgcagccg
aagggtggtagagggggcggtggtgccgcagggccacaggtgggtggtaattatggtggt
ggccgtggaggagctgttggacctggtgctggtggtggagcaggtggaggcggtggaaat
tggggaagaggtggcggaggcatggggaatagaggccctgttggtaatatgaggaatagg
atgggcccagctggtggcggccgtgggataatggggaatggagggatggttgcaccgcca
ccaccaatgatgccgccgggtggaatgctggggcagggttttgatcctgctggttacggc
gctatgggaaggatgggtggtggatttggcggttttcctggtggaccaggggctatgcca
ttccctgggctgatgcagccattcccgccggttgttgctccacatgttaacccagctttc
tttggtcggggcggaatgggtgctggtggaatgtggcctgatcccaacatgggagcctgg
ggtggggaggaacaatcaagttacggggatgacacagcttctgatcagcagtatggagaa
ggagggagccatggaaaagagaggccaccagagagggagtggtctggtgcaccagagagg
aggcgtgaaagggagaaggatgcgcctcctgcacaggagtggccagagaggaggcaccgg
gatgagcgtgacatggaccgagagaggaatcgtgactatgacagagacagggaaagagac
cgtgatagggaaagagaccgagaccgagacagggagagggacagagatagggagagagag
agggagagggagagggagagggagagtcatagggatgacagagatcgctatggcgattat
cacaggcacagggatcgtgattcagaacgtaatgagggctgggacagggggaggtcatct
gggatacgcagcaggtcaagggaggctgaccactctaagcgcaggcggatgacacctcag
tag
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