KEGG   Miscanthus floridulus: 136476834
Entry
136476834         CDS       T10264                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mflo  Miscanthus floridulus
Pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136476834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136476834
   03041 Spliceosome [BR:mflo03041]
    136476834
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     136476834
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     136476834
Spliceosome [BR:mflo03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    136476834
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35
Other DBs
NCBI-GeneID: 136476834
NCBI-ProteinID: XP_066330891
LinkDB
Position
8:complement(82068302..82071954)
AA seq 389 aa
MGKAEARSRGRGGGGGGGGGSSGGSSGNPGKIFVGGLPRDTTDATFVRHFGQYGEIVDSV
IMKDRYTSQPRGFGFITYSNPAVVDKVIEDKHVINGKQVEIKRTIPKGSLQSSSKDFKTK
KIFVGGLPSTLTEDDFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLAN
GNMIDLAGSKVEIKKAEPKKSSNPPPPPPVHGRNARSVYDSGSRDHPSADNYDGMANAYG
NYRGGGFGPYRSDTGFGARLGNYGGIGDFGGAYGRYYAGLGGYGAASSFGYPGRFGLYGG
GFGGAYAGGDLSAYRRGGADESFSAPGNSGFGGDADESFGGPGSSGFSGTAYGGAYEYDP
TLGGYGSASTPDTKRGSFTGGYGRYHPYG
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggggaaggcggaggcgaggtcaagggggcgcggcggcggcggtggtggcggcggcggc
agcagcggcggcagcagcggcaatccggggaaaatcttcgtcggagggctcccgcgggac
accactgatgctacatttgtcaggcattttggacaatatggagaaatagttgattcagtg
ataatgaaggataggtacacatctcagccaaggggttttggcttcattacatactctaac
cctgctgttgttgataaagtgatagaggacaagcatgttatcaatggaaagcaagttgag
attaagagaaccataccaaaaggttctctgcagtctagctccaaggatttcaagactaaa
aagatatttgttggtgggcttccctcaacactaacagaagacgatttcaagagtttcttt
gcaagatatgggactgtggtagaccaccagattatgtttgatcatgagaccaaacgttct
cgaggctttggatttatagtttttgcttctgagcaagttgtagatgatttgttagcaaat
ggaaatatgattgaccttgctggttcaaaggtggagatcaagaaagcagaaccaaagaaa
tcctccaatccaccaccaccaccaccagtgcatggtagaaatgctaggtcagtatatgat
agtggctctagggaccacccttctgctgacaactatgatggaatggccaatgcttatgga
aattacaggggtggtggatttggtccttataggagcgacacaggtttcggtgctaggctc
ggcaactatggtgggataggtgattttggtggtgcatatggtcgttactatgcaggatta
gggggctacggagccgcgtcttcgtttggttatcccggtcgctttgggttatatggagga
ggttttggtggagcttatgctggtggtgacttaagtgcctatagacgcggtggtgctgat
gagagcttcagtgcccctggtaattctgggtttggtggtgatgctgatgagagctttggt
ggccctggtagttctggctttagtggcaccgcctacggtggggcatatgaatatgatcct
acgctaggtggttatggatctgctagcacacctgacacgaaaaggggaagcttcactggt
ggatatggacgatatcacccgtatggatga

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