KEGG   Miscanthus floridulus: 136476835
Entry
136476835         CDS       T10264                                 
Name
(RefSeq) elongator complex protein 2-like isoform X1
  KO
K11374  elongator complex protein 2
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mflo03016]
    136476835
Transfer RNA biogenesis [BR:mflo03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    136476835
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_RFWD3 NBCH_WD40 Beta-prop_IFT122_1st WD40_Gbeta Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 136476835
NCBI-ProteinID: XP_066330893
LinkDB
Position
8:82597444..82602715
AA seq 870 aa
MSPAAGEQLSGSHREGRSVEARRIFIGAGCNRVVNNVSWGACGLVAFGTQNAVALFSPLR
GEIVTTLPGHKAPVNCTLWLPTKKDVLQVRGRETHYLLSGSADGTIMAWKIGSGKGEWSH
ALQLPGMHKKGITCLAGRMVSDAVAIFASTSSDGIVVIWEMAIEPAPGGDCKVSCLHSLS
VGLKPMVSLSLAVLPERGHLILAMGGLDHKIHIYCGDKAGKFIKACELKGHSDWIRSLDF
SLPVMMGGEKHNLFLVSSSQDRTIRIWKMTSEAASSGSSVQLRKGTIEMTSYIEGPLFVA
GSTSYQVSLESLLVGHEDWVYSVEWQPPTLLTGDEAHQPMSILSASMDKMMMIWRPEKNT
GLWINSVTVGELSHSALGFYGGHWQPDGRSILAHGYGGSFHMWRDVGLDSENWQPQIVPS
GHFAPVSDLTWARSGQYLLSVSHDQTTRIFAPWRNQVNPGDMIYWREIARPQIHGHDLNC
VTFIQGSGNHRFVSGADEKVSRVFEAPLSFLKTLQQATLLKPDISEDFDNVQVLGANMSA
LGLSQKPIYTHAGVKESPSGNSNDGPDSMETIPDAVPTVFTEPPVEDQLAWNTLWPESHK
LYGHGNELFSICCDYEGKLVASSCKSQSAAVAEIWLWEVGTWKAVGRLQSHNLTVTQMEF
SHDNAFLLSVSRDRQLSIFSFRKIEGAEHRLVAKLEAHKRIIWACSWNPFGYEFATGSRD
KSVKIWCVEDASSVKLLATLPQFCDSVTALAWMGRDRASNAGILAVGMDNGLIELWSISG
GRASAGSTPDSPLSVACVLRFDPVLCHVSTVHRLRWREPSSTDEESTLELASCGADHTVR
VFELATRTQQQLRNQEIDKDEEPTSNSHES
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgtcgccggccgccggagagcagctctctggatcccacagagagggcagatccgtggag
gcgcggaggatcttcataggcgccggctgcaaccgcgtggtgaacaacgtctcgtgggga
gcctgcggtctcgtcgccttcggcacccagaacgccgtcgccctcttctctccactgaga
ggtgagatcgtgacaactctcccggggcacaaggcgccggttaactgcacgctatggctt
cccacgaagaaggatgtgctacaagttcgtggcagggagacccactatctactctcagga
agtgctgatggtactatcatggcttggaagattggttctggcaaaggagagtggtctcat
gcattgcagctcccagggatgcataagaaagggatcacctgtcttgctggaaggatggtg
tctgatgctgttgcaatttttgcctctacttcttcagatggtattgtggttatttgggag
atggcaattgagcccgcccctggtggcgattgcaaggtgtcttgcctgcattctctgtcc
gttggtttgaaaccaatggtttcactttcattagctgtattgccagaacgaggccatctc
attttggcgatgggcggtttagatcacaagatccacatctattgtggggacaaggcaggc
aagttcattaaggcctgtgaacttaaaggtcattctgattggatcagaagtttagacttt
tctttacctgtgatgatggggggtgaaaagcacaaccttttccttgttagctcatctcag
gacagaaccattcggatatggaaaatgacttcagaagctgcttcttctggctcctccgta
caattgaggaaaggaactattgagatgacctcctatattgaaggacctctatttgtggcc
ggtagtacaagttaccaagtatcattggagtctcttcttgttgggcatgaggattgggta
tattcagtagagtggcagccgcctacactgttaactggggatgaagctcatcagccaatg
agcatattatctgcatccatggacaagatgatgatgatatggaggccagagaaaaatact
ggcctttggattaattcagtgactgttggtgaattaagtcactccgcacttggattttat
ggtggacattggcagcctgatggcagatccattcttgcacatggttacggtggatccttt
catatgtggagagatgttggactggattctgaaaattggcagcctcagatagtcccatct
ggtcattttgcacctgtttctgacttgacatgggcaagatctggccaatatttgctatca
gttagccatgaccagacaacacgtatatttgctccttggagaaatcaagttaaccctgga
gacatgatctattggcgtgaaattgcccgtccgcaaattcatggccatgatctcaactgt
gtgacattcattcagggtagtgggaaccatcgctttgttagtggtgctgatgaaaaggtc
tctagagtctttgaagcccccttatcatttttgaagaccctacaacaagcaactctgttg
aaacctgacatctctgaggattttgacaatgttcaagtccttggagcaaatatgtctgct
cttgggctttcacagaaacccatatatacacatgcaggagtcaaggaatccccaagcggt
aattctaatgatggtccagattctatggaaacaattcctgatgcagtgcctactgtattc
actgagcctcctgtggaggaccaacttgcatggaatactctatggcctgaatcacacaaa
ctatatggtcatggaaacgagctcttctcgatatgctgtgattatgaagggaagcttgtt
gcatcatcttgcaagtctcaatcagcagcagttgctgagatctggctctgggaggttgga
acatggaaagctgttgggcgcttgcaatctcacaatctaacagtgacacaaatggagttc
tctcatgataatgcttttcttttaagtgtttcaagggatcgccaattgtctatcttttca
ttcaggaaaatcgaaggagcagagcaccgtctggttgcaaagcttgaagcacacaaaaga
attatatgggcgtgctcatggaatcccttcggctatgaatttgcaactggttcgagggac
aagagtgtcaagatatggtgtgttgaagacgcatcttctgtcaagctacttgcaacattg
cctcagttctgtgacagtgtaactgcattagcatggatgggccgtgaccgtgcttctaat
gctggtatcctcgctgttggcatggataatggattgatcgagctctggagcatttctggt
ggaagagcttctgcaggaagtactccagactctccactcagtgtggcatgcgtgcttcga
tttgaccctgtcttgtgccacgtgtcaactgttcaccgtttacggtggcgggaacccagt
tccaccgatgaggaatcaacacttgagctcgcttcttgtggagctgaccacactgtaagg
gtgtttgagctagccaccaggacgcagcaacaactgaggaaccaggagatcgacaaagac
gaagaaccaacttcaaattcacatgaatcatag

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