Miscanthus floridulus: 136477057
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Entry
136477057 CDS
T10264
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP71-like
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136477057
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136477057
Enzymes [BR:
mflo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
136477057
Spliceosome [BR:
mflo03041
]
Complex C
Other components
PPlases
136477057
Chaperones and folding catalysts [BR:
mflo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
136477057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
136477057
NCBI-ProteinID:
XP_066331166
LinkDB
All DBs
Position
8:97596688..97602105
Genome browser
AA seq
647 aa
AA seq
DB search
MASASETTEQSTITSTAVDDGGALESKREHLNGAAATPTVGQEEDEMIGPGPAPAKPRQK
RPLQFEQAFLDALPSAAMYEKSYMHRDVVTHVAVSPADFFITGSADGHLKFWKKKPVGIE
FAKHFRSHLSPIEGLAVSVDGLLCCTISNDRSVKIYDVVNYDMMFMMRLSFVPGAIEWVH
REGDVKPKLAVSDRNTPFVHIFDTHSGSNDPIMSKEIHGGPVQVMKYNHIHDVVISADAK
GLLEYWSPSTLKFPENEVRFRLKSDTNLFEIAKCKTSVSAIEVSNDGTQFAVTSPDRRIR
VFWFKTGKLRRVYDESLEVAQDLQRSDVPLYHLEAFDFGRRMAVEKEIEKTENVPQPNAV
FDESCNFLIYATLLGVKIVNLHTNKVSRILGKVENNERFLRIALYQGDNGNKKVRKIPSV
AANVNDSKEPLSDPTLLCCAFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPPEELLSVS
DLGKTATTSLPDNLVLHTSMGDIHLRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGF
MIQTGDPLGDGTGGQSIWGTEFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATP
WLDNKHTVFGRVVKGMDVVQQIEKVKTDKNDKPYQDVKILNVTVPKT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggccagcgagacgacagagcagtccaccataacgagcactgctgtggacgac
ggtggtgcgctcgagagcaagcgggagcacctcaatggcgcggcggctacccctactgtg
gggcaggaggaggatgagatgatcgggccgggccctgcgccggcgaagccgcggcagaag
cgcccgctccagttcgagcaggcgttcctcgacgccctcccctccgccgccatgtatgag
aagagctatatgcatcgggatgtcgtcacgcacgtcgctgtttctcctgctgacttcttc
atcactgggagtgcagatgggcacctgaagttttggaagaagaaacctgttgggattgaa
tttgctaaacattttcggtctcatctcagtcccatcgaaggtctagctgtgagtgttgat
ggattgctttgctgcacaatatccaacgatcggtctgtgaagatatatgatgttgtaaac
tatgacatgatgttcatgatgcgtctctcatttgttcctggggctattgagtgggttcat
cgagaaggagatgttaaaccaaaacttgccgttagtgaccggaatacaccttttgttcac
atatttgacacccattctggttcaaatgacccaatcatgtccaaagagattcatggtggc
cctgtccaagttatgaaatataaccacattcatgatgttgttatatctgctgatgccaag
ggactgttggaatactggtctccatctaccctcaagtttccagaaaatgaggtgaggttt
cgcctgaaatcagatacaaatctatttgaaattgcgaaatgcaagacaagtgtgtctgca
attgaggtaagcaatgatggcactcaatttgctgtcacatcccctgatcgcaggatacgg
gtattttggttcaaaactgggaaattaagacgtgtatatgacgagtccctagaggtggca
caagatcttcaaagaagtgatgttccattgtatcaccttgaggcttttgattttggacga
cgaatggctgtggagaaggaaatagagaaaacagaaaatgttccacaacctaatgctgtc
tttgatgagagctgcaattttcttatttacgctacccttttgggtgtaaagattgtaaat
ttgcacacaaataaggtttcgcgcatcctggggaaggtagagaacaatgagaggtttctg
agaattgcactataccaaggagacaatggcaacaagaaggttagaaaaataccttcagta
gctgccaatgtcaatgatagcaaggaacccttatcagatccaacactgctttgttgtgct
ttcaagaagcatcggatatatctctttagtcgtagggaaccggaagagcctgaagatgca
actaagggtagagatgttttcaatgaaaaaccacctccagaagagcttttgtctgtatca
gacctaggcaaaactgctacaacatcattgcctgataatttggtgctacacacttctatg
ggtgacattcacttgagactatatccagaagagtgtccaaaaactgtggaaaacttcact
acccattgccggaacggttattatgacaatcttatatttcaccgtgtgattaaaggattc
atgattcagactggagatcctttgggggatggcactggtgggcaatcaatctggggcact
gaatttgaagatgaatttcacaagagcttgaggcatgataggccttttacactttccatg
gccaatgcgggacctaataccaatggttctcaattctttatcaccactgtggcaactcca
tggctagataacaaacacacagtgtttggtagagttgtgaaagggatggatgttgtccag
caaattgagaaggtcaagactgacaagaatgacaaaccatatcaagatgtaaagatcttg
aatgttacagttcccaagacataa
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