Miscanthus floridulus: 136477167
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Entry
136477167 CDS
T10264
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136477167
Spliceosome [BR:
mflo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
136477167
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
RBD_AKAP-17A
DUF8400
Motif
Other DBs
NCBI-GeneID:
136477167
NCBI-ProteinID:
XP_066331326
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All DBs
Position
8:complement(112309775..112315570)
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AA seq
462 aa
AA seq
DB search
MPSGSATQFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANRNQAFVE
FADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ
PNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLL
PEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPIVGPDGKIKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGSVQKIAMFEKNSGMQALIQYPDITTTAVAKQ
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTLSDPNAQLQAAAQAPVLSSPGV
AWHNTASAPAAPFYASTAASTPVGQVPAWNPNMQTGGFASASTAYPNQPLMANSMPHYPA
IGSSSGALPVSFQASQQMPQYGMPPGAPPHAPPAGQPMYFPK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgggtcggccacgcaattccggtacacgcagacgccgtccaaggtgctgcac
ctgcggaacatgccgtgggaatgcaccgaggaggagctcgtcgagctctgcaaacccttc
ggcagggtagtaaacaccatgtgcaacgtcggcgccaaccgcaaccaggccttcgtcgag
tttgcagatcaaaaccaggcaatttcaatggtgtcctattatgcttcatcttcagaacct
gctcaagttcgtggtaaaactgtatatatccaatattcaaacaggcaagaaattaccaac
aataaaggcactggtgattcttctggcaatgtcctacttgtcacttttgaaggtgtccag
cctaatgatgttaccatagaagtcattcatttggtattttcagcatttgggtttgttcac
aagatagctacatttgagaaagcagctggtttccaggcgcttatccagtatactgatgcc
ccaactgctcttgaagctaaaaactcattggatggaagaagcatcccaaaatatttactt
ccagaacatatcagcgcctgccacatgcgcatcaccttttctgcgcataaggatttgaat
atcaaatttcagtcgcatcgcagcagggattacaccaatccttatcttcctgtgaaccaa
acggcaattgaggggattgtgcagcccatagtaggccctgatgggaagataaaggagcct
gagagcaatgtacttttagcatcaattgagaacatgcaatatgctgtgacggtggatgtt
ctgcacactgtgttttctgcttttggtagtgttcaaaaaattgcaatgtttgagaagaac
agtggaatgcaggctctaatccaatatccagatataacaaccacagccgttgctaaacaa
gctttggagggacactgcatatatgatggtggttactgtaagcttcatctgtcatactct
cgtcatactgatctcaatgtaaaggcgcatgatgagagaagtagggactacactctttca
gaccctaacgcgcagctgcaagctgctgcacaagcgccagttctaagctctccgggagtg
gcatggcacaacactgcatcagcaccagctgctcctttttatgcaagcacagcggcttca
actcctgttggacaagtgcctgcttggaatccaaacatgcagacagggggttttgcatct
gcatcgactgcgtaccccaaccaaccattaatggccaactccatgcctcactatcctgct
attggatcgagttccggtgccctgccagtatcgtttcaggcttcacagcagatgccacag
tatggcatgccccctggtgctccgccgcacgcaccaccagctggccaaccaatgtacttc
ccgaaataa
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