Miscanthus floridulus: 136477237
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Entry
136477237 CDS
T10264
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136477237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136477237
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
136477237
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
136477237
NCBI-ProteinID:
XP_066331438
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Position
8:complement(120824681..120826625)
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AA seq
221 aa
AA seq
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MGLEMEVMSEAAPAAAREHGLDIYPLTRYYFGARDAAAGVPRGLETAADRALRLKANFAA
HGLRTSVHGVLLVELLDHPHLLLLQVRNSSFLLPGGRLRPGEEEVQGLKRKLSSKLSFVD
DDQAIEEEDEWQIGECIGMWWRSEFEAIPFPYMPPSFRAPKECIKLFLIRLPMSRQFIVP
RNMKLLAVPLSQIHGNAQVYGPIISGIPNLLSKFSFNVISD
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggggctcgagatggaggtcatgtctgaggctgctcctgcggcggcgagggagcacggg
ttggatatttacccgctcacccgctactacttcggcgccagggacgccgccgccggcgtg
ccccgcggcctggagaccgccgctgaccgcgcgctacggctcaaggcaaacttcgcggcg
cacgggctccgcaccagcgtccacggcgtcctcctggtggagctgctcgatcacccgcac
ctgctgctgctgcaggtccggaactcctccttcctgctccccggaggccgcctcaggcct
ggcgaggaagaggtccaagggctcaagcgcaaactctccagcaagctctcctttgtcgat
gatgaccaggccattgaagaagaggatgagtggcagattggagagtgcatcggaatgtgg
tggagatctgaatttgaggccatcccatttccatacatgcctccaagcttccgtgcacca
aaggaatgcatcaagctgttcctgatcaggctgccgatgtctcggcagttcatcgtgccc
aggaacatgaagctcctggccgtgcctttgtcccagattcatggcaatgctcaggtttac
ggtccaattatatctggcattccgaatctactgtccaagttctccttcaacgtcatcagt
gactga
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