KEGG   Miscanthus floridulus: 136477439
Entry
136477439         CDS       T10264                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
mflo  Miscanthus floridulus
Pathway
mflo03030  DNA replication
mflo03410  Base excision repair
mflo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    136477439
   03410 Base excision repair
    136477439
   03420 Nucleotide excision repair
    136477439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mflo03032]
    136477439
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136477439
Enzymes [BR:mflo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     136477439
DNA replication proteins [BR:mflo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    136477439
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      136477439
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 136477439
NCBI-ProteinID: XP_066331699
LinkDB
Position
8:160170346..160193370
AA seq 2206 aa
MSGRRGPAARGGGGGGSGNWRRSGSAKAKEQRLRLGAEELLESRLGFAPYTDGERRLGWL
LTFSPSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYNFRPYFYAATKDKMDLEVEAYIRR
RYEGEISDIEIIEKEDLDLKNHLSGLKRKYLKLQFDTVQQLMRVRNDLLHVVEKNEEKID
AVEAFESVHGVKRVERPQDYINYIIDLREYDVPYHVRFAIDNDVRSGQWYNVSVSGSDVL
LQRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDTIMMISYMIDEQGYLIINRECVGED
IEDLEYTPKPEFEGYFRVKNVQTELDLLKAWFSHMQEVKPGIYVTYNGDFFDWPFLEKRA
AHHGIKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD
PLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLANIIPMSPDEVLRK
GSGTLCEMLLMVQAFKASVICPNKHQADLEKFYNNRLLESETYIGGHVECLETGVFRSDL
PTKFQLEPLAYEQLIGNLDRDLQYAIAVEGKLDIDSVTNYDEVKDAIEQKLVALRDHPIR
EERPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRKLEWVWRGETY
MAKKNDYYHIKRQIESELIQSGGIASSKPFLDLSKPEHLLKLKDRLKKYCQKAHKRVVDK
PITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLTEAKASGNSMKIQEAQD
MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRP
LELDTDGIWCVLPGSFPENFTFKTKAGKKLTISYPCVMLNVDVARNNTNDQYQTLKDPVN
KTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLAELKGFEIKRRGE
LKLIKVFQAEVFDKFLHGSTLEECYSAVASVANRWLDLLDNQGIDIADSELLDFISESST
MSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSERAVPVAI
FETDPEIAKHYLRKWCRISSDASIRSIVDWSYYKQRLSSAIQKIITIPAAMQKISNPVPR
VLHPDWLHKKVREKDDRFRQRKLRDIFSPLSKEEGLQNLNRTGDMEDLLISNKDLRKNPC
HGLDIDKENNTNGASVGTGSNNSKKQQNCITGLNVPRASQIQNDAADETVDKSTDYQGWL
DAKKRKWKYVREQKKRRRLGAAATFDSPNALLLARHANQLPGNIRNRSTVFQKQELALFR
SHWQIIQLASSTVPGHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILP
HGRPCFNLIEVVTTEEQFRAEGKKLAAHLAEPDVEGIYETKIPPDLNAVLQIGCVCKVDK
SAKKRSIQDGWDLAELQMKTTAECSYLEQTVSFFYLYHSLNEGRAVYVFYFPTSLRIHAV
VVNPFRNKEISPSFLEKQFQDACQALGSVPENLSFHVDYQTLIDAGSKYVQRMLLEYRQQ
HPGPVIGIIECPKLQAIKAAVRALDDFPCVTIPSNARDNNYLALGWQATAGRTSMQRCAA
STQWFSERISLARYAHVPLGNFELDWLLFTADVFFSRALRDQQQVLWISDDGIPDLGGTY
EGETCFADEVIQPALTYPGAYRRVSVELKIHHLAVNALLKSSQVDEMEGGSIGSFGNDVP
PGPHGTETDFDDAILCIPAFQVLKQLIQRCISDAVSSGNVFADAILQHLYRWLCSPRSKL
HDPALHRLLHNAMKKVFALLLAEFRKLGANVIFANFSKIIIDTGKVDLSSAHAYCDSLLK
TLQTRDLFEWIELEPLHFWHSSLFMDQYNYGGIQAKTQNTDSSDGDNDIDIVSSWNMAED
LPKDTQDHFVLIVSEFLYIPWKFMKEQVATQATIRDDTSCTPSVTVMAAENLEGQVIEHL
RDKISNYFADKLLRTVSDILHHFKGKSKHESDEPANRESDPHTHKGDAALEFIKHICAVL
ALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRD
STLRGQEWRCAVPQCGQPYHREHMENALLQVVRQRERLYHLQDLVCVRCRQVKAAHLSEQ
CSCGGSFRCKEESSYFLSKMRVFLKVAVSQKFQLLQDCVRWILEVR
NT seq 6621 nt   +upstreamnt  +downstreamnt
atgagcgggcggcggggtccagctgctagaggaggcggagggggaggcagcgggaactgg
cggcggagcgggtcggcgaaggcgaaggagcagcggctgcgcctgggcgcggaggagctc
ctcgagagccggttgggattcgcgccatacactgacggggagcggcgcctcgggtggctt
ctcaccttctcgccgtcatcatgggaagacgaggacaccggaaaaatctacagctgtgtt
gacttatactttgtgtcacaggatgggtctacatttaaagtgaagtacaattttcggcct
tacttttatgccgcgactaaggacaagatggatttggaagttgaggcatatattaggcga
cgttatgaaggggaaatttctgacatagaaataattgagaaggaggatttagatctgaaa
aatcatctttctggcttgaagagaaaatacctgaagcttcagtttgataccgtacagcaa
ttaatgcgtgtaaggaatgacctattacatgttgttgaaaagaatgaagaaaaaatagat
gccgtggaggcatttgaatcagttcatggtgtaaaaagggtagaaaggccacaagattac
ataaattacatcattgatttgcgtgaatatgatgttccatatcatgttcgttttgctata
gataatgatgtcagaagtggacagtggtacaatgttagtgtatctggttctgatgttttg
cttcagagaagggaagacctgcttcagcgtgcagaagttcatgtatgtgcatttgatatt
gagaccacaaagctgcccctgaagtttccagatgctgaatacgacaccataatgatgatt
tcatacatgattgatgaacaagggtacctgataatcaacagagagtgcgttggagaagac
attgaagatttggagtacacacctaaacccgaatttgaggggtattttagagttaagaat
gttcaaactgagttggatctacttaaagcatggttttctcatatgcaagaggttaagcct
ggcatttatgttacatacaatggtgacttttttgactggccatttttagagaagagggct
gcacaccatggaataaaaatgaatgaggagattggtttccaatgtgacaataatcagggc
gagtgtcgggctaaattttcttgccatcttgactgttttgcttgggtgaagcgagacagt
taccttccacaaggaagccaaggtctaaaggctgttacaaaagccaagctaggttacgat
cctctggaggttaatccagaagatatggttcgctttgcaatggagcagccacagacaatg
gcttcatattctgtatcagatgctgttgcgacgtactatctatacatgacttatgtccat
cctttcatcttttctcttgcaaacataatacctatgtcacctgatgaggtactgcggaaa
ggaagtgggacactttgtgaaatgctgctaatggttcaggcattcaaggctagtgtcatt
tgtcctaacaagcaccaagctgatctggagaagttctacaataaccgtttattggaaagt
gaaacctacattggtggtcatgttgagtgtcttgaaactggtgtgtttagatctgatctc
cccacaaagttccaacttgaaccattagcatatgagcaactcattggaaatcttgatcgt
gatctgcaatatgccattgctgtagaaggaaagttggatattgattctgtcacaaattat
gatgaagtcaaggatgccatagagcaaaagcttgttgcattgcgagatcacccaattcgt
gaagaacgacctcttatatatcatctggatgttgctgctatgtatccaaatattatttta
actaatagactccagccaccatccatagttacagatgtggactgcacagcatgtgatttt
aatcgtcctggaaaaaattgcctcagaaagcttgaatgggtctggcgaggagagacctac
atggcaaaaaagaatgactattatcacataaagaggcaaattgagtcagagctgattcaa
tctggtggcattgcatcgtcaaagccttttcttgacctctcaaaaccggaacatttactt
aaattgaaggatcgtttgaagaaatactgccaaaaggcgcacaaaagagttgttgataaa
ccaattactgaagtcagagaagctggaatatgcatgcgtgaaaattctttctatgtagac
acagtacgaagttttcgtgatagaagatatgaatacaaaggtcttaacaaaacatggaaa
ggaaaattgacagaagcgaaagccagtggaaattctatgaaaattcaggaagcacaggac
atggttgtcctatatgattctttgcaacttgctcacaagtgcatattgaattctttttat
ggatatgttatgcgaaagggagcaagatggtactctatggaaatggctggtgtcgtaaca
tatactggtgcaaagattatccaaaatgctcgattacttgtggaaaaaattggaaggcca
ctggaactggatacagacggcatttggtgtgttttgcctggctcatttccagaaaacttt
actttcaagacaaaagctggtaagaagctaacaatatcttatccctgtgtcatgctcaat
gttgacgttgcaaggaacaacactaatgatcaatatcaaacattgaaagacccagtaaat
aagacatatacaacacacagtgagtgttccattgagtttgaggttgatggaccttacaag
gccatgatcttacctgcctctaaagaggaagggattctgataaagaagaggtatgctgtc
ttcaatgaagatggcaccttggcagaacttaaaggttttgaaatcaagcgtagaggtgag
ctgaagctcataaaagtttttcaggcggaggtatttgacaaatttcttcatggttcaact
ttggaggagtgctattctgctgttgcctctgttgctaaccggtggttggacctactggat
aatcaaggaattgatattgctgacagtgaattgcttgatttcatatcggagtcgagcaca
atgagtaaatctttagttgactacggagagcagaagtcatgtgctgtaactacagcaaaa
agactcgccgaattccttggagattcgatggttaaagacaaaggactacattgccaatat
attgttgctcgggagccacaaggcactccagtgagcgagcgtgctgttccagtagctata
ttcgagacagatcctgagattgcaaagcattatttaaggaaatggtgtagaatctcctct
gatgcaagcattcgatctattgttgattggtcttactacaagcaacgcctaagttcagct
attcagaaaatcataacaattcctgcagcaatgcaaaagatctcaaatcctgttcctcga
gttcttcatccagattggttacacaaaaaggtcagggagaaagatgatcgatttcggcag
cgtaaactgcgtgatatcttcagtcccttgtctaaagaagaggggctgcagaacttgaat
aggactggagatatggaagatttattaatttcaaacaaggatttgagaaaaaatccttgt
catggtttagacattgacaaagaaaataatacaaatggagcatcagtgggaactggttcg
aataatagtaaaaaacaacaaaattgtataactgggttaaatgttccccgtgcttcacaa
atccaaaatgatgctgctgatgaaacagttgataagagtactgactatcaaggatggctt
gatgctaagaaaagaaaatggaaatatgtccgtgaacaaaaaaaacgtcgaaggttgggt
gctgctgccacttttgatagtcctaatgctttgctcttggcaagacatgccaatcagtta
cctggcaacattcggaatagatctacagttttccagaaacaagaattggctctctttaga
tcacattggcagataatccagcttgcttcaagtacagtgcctggtcacttttttgcgtgg
gttgttgctgaagggattatgttcaagattcctattaatgtgcctagaactttttaccta
aactcaaaggctcctgtcacagaagagtttccaggaaggcgtgtcaaaaagattctccca
catggaagaccttgtttcaacctcattgaggttgtaacaactgaagaacagttcagggct
gaaggcaaaaaacttgcagctcatctagcagagccagatgttgagggaatatacgagaca
aaaattccaccagatctcaatgctgttctccaaattggctgtgtatgcaaagtggacaag
tccgcaaaaaaacgaagtatacaagatggatgggatctcgctgagttgcaaatgaaaaca
accgccgagtgctcatatctggaacaaacagtttcatttttctatttataccacagcttg
aatgaaggaagggctgtatatgtattttacttccctacgtctctccgaatacatgcagtg
gttgtcaatcctttccgtaacaaagaaatatctccgtcatttcttgaaaagcaatttcaa
gatgcttgccaagcccttggttctgtccctgagaatctctctttccatgtggactaccaa
acattaattgatgctggcagcaaatatgtgcaaagaatgttacttgagtacagacaacaa
catcctggacctgtcataggcatcatagaatgccctaaactccaagctataaaggcagct
gtacgagcacttgatgatttcccatgtgtaaccattcctagcaatgcacgggacaacaac
tatctggctctcggttggcaagcaacagctggtcgaacaagtatgcagcgttgtgctgca
tcaacccaatggttcagtgaacggatttcactagctagatatgcacatgtgccactgggt
aattttgagctagactggcttctttttactgctgatgtatttttttcaagggcattgcgt
gatcaacagcaggtactatggatatctgatgatggcattcctgatttaggaggcacttac
gaaggagagacatgttttgctgatgaagtcattcagcctgcacttacttatcctggtgca
tatagaagagtttctgttgagcttaagatccaccatttggcggttaatgctctcctaaaa
agtagtcaagtggatgaaatggaaggaggatcaattggtagctttggaaacgacgtgcct
cctggtccacatggcactgaaactgactttgacgatgctatcttatgtatacctgctttc
caggtgctaaagcaacttattcaaagatgcatttcagatgcagtgtcgtctggaaatgta
tttgctgatgcaatattgcaacatctctaccgctggctttgcagcccacgatcgaaactt
catgatccagctctccatcgtcttcttcataatgcaatgaagaaagtctttgctctattg
ttggctgagttccgaaagctgggagctaatgttatatttgcaaacttttctaagataatc
atagatactggaaaagtagatttgtcatccgcacatgcatattgtgatagcttattaaag
accttgcagacaagggatcttttcgagtggatagaattggaaccattgcacttctggcat
tcgtcactgttcatggatcagtataactatggcggaattcaagctaaaacacaaaacaca
gactcttcagatggtgataatgatattgacattgtctcaagctggaacatggcagaagat
ttgcccaaagatacacaggatcactttgtcttaattgtatccgaattcctatatattcca
tggaaattcatgaaggaacaagtagctactcaagctaccataagggatgatacctcatgc
actccatctgtaacagtcatggctgccgagaatcttgagggccaggtgatagaacacctc
cgtgacaagattagcaattactttgcagacaagcttctaagaactgtaagtgatatactt
caccatttcaaagggaaaagcaagcatgagtcagatgaacctgcaaatagagaatccgat
cctcacacgcataaaggcgacgctgcattggagttcattaagcatatctgtgcagtcctt
gctcttgatcagaatgttcagcatgatattttgagaatgaggaagaacttgttaaagttg
gttcgcgtaaaggagtttgctccagaagcacaattccaagacccatgtgcctcgttcact
ctgccaaatgtgatctgcagctattgcaatgattgccgggacctggatctctgccgtgac
tcaacactccgaggtcaggagtggagatgcgcggttccgcagtgtgggcaaccataccac
cgtgagcacatggagaacgcacttctacaggtggtccgccagcgagagaggctgtaccac
ctgcaggatctggtgtgcgtgcgctgcaggcaagtgaaagccgcccatttgtcggagcag
tgttcctgtgggggctccttccggtgcaaggaagagtcttcatattttctcagcaaaatg
cgggtattcctgaaagtggcggtcagccaaaagttccagctcctgcaagattgcgtgcga
tggattcttgaagtcagatga

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