Miscanthus floridulus: 136477826
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Entry
136477826 CDS
T10264
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136477826
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136477826
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
136477826
Protein phosphatases and associated proteins [BR:
mflo01009
]
HAD phosphatases
Fcp/Scp phosphatases
136477826
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
136477826
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
136477826
NCBI-ProteinID:
XP_066332182
LinkDB
All DBs
Position
8:complement(194455469..194465489)
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AA seq
935 aa
AA seq
DB search
MFKSMVYYGNTSIGEVEVWPKGEASEGLAVAAWAREIRVDRLSPPSERCPPLAVMHTVAV
GARCLVMESRPPVAADVAPMPLVAMHAACLRDNKTAVVPLGDGELHLVAMTSRRNLTNHA
CFWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTSRSFEDRIDGLQRKLSNETDP
QRRNGMLSEIKRYQDDKSILKQYIEGDQVYDDGKVYKAQPEIVPPLSDNQQPMTRPVIRL
QDKNIILTRIDPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR
LLDPDSRLINSVQLHDRMVCVKSGLKKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQLR
VHVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVHYEDEVN
DISSAPDVGKYLITEDENAALVNGNRDSLPFDGMADAEVERRMKEANAQAFHQTAGNFVM
PVAPAQNFVSSSVAPLALPLGMMPPPFSQPVVQPGFSDSLQGSPAREEGEVPESELDPDT
RRRLLILQHGQDTRDPTPPLPAIPPVQVPVPPVQPHGNWFPTEDGLNPSNLNRGSAGFTV
ESDSMLYEKKQPPHPSFFHGGDSPMSSDRFGYQNQRFPSQLPHTEDHHILQNHAPPKYRS
FSGEELAARHVPSSQRNNQIESGRHFAQYAGTSAGILEGIALKCGSKVEYRSTLCDTAEL
QFSIEVWIVGEKVGEGIGRTRREAQRQAAEMSLRNLANKYLSSDPNRLTDMKENGFSSNR
NVFGYSGNTRDDMLPFSSTSEESRFMKMEENNSRKTGGSVAALKELCMVEGYNLVFQERP
SPADGLVGKESYAQVEVGGQILGKGVGLTWEEAKLQAADEALGTLRSMLGQLGHKRSGSP
RSLAPNFNKRFKPDFPRTVQRVPYGTYSRIEGHVP
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtcgatggtttattacgggaacacctcaatcggagaggtggaggtgtggccc
aagggcgaggcgagcgagggcctggccgtggcggcgtgggcgcgagaaatccgcgttgac
cgcctttccccgcccagcgagcggtgccctccgctggcggtcatgcacaccgtggccgtc
ggcgcccgatgcctcgtcatggagtccaggccgcccgtcgccgccgacgtggcgccgatg
cctctcgtcgccatgcacgccgcttgcctcagggacaacaagactgcggttgttccactt
ggagatggagaattgcatttagttgcgatgacatccagaagaaacttgacaaatcatgca
tgtttctggggctataaattgccatttggtttgtataattcttgcttgaccatgttaaat
cttcggtgcctgggtatcgtgtttgaccttgatgagacattgattgtcgccaatacatca
cggtcttttgaggacagaatcgatggacttcaaagaaagctgagtaatgagactgatcca
cagcgtaggaatggtatgctatcagagatcaaaaggtaccaagatgataagtccatccta
aagcaatatatagaaggtgatcaggtctatgatgatggaaaagtgtataaagcacaacct
gagattgttccaccattgtctgataaccagcaaccaatgacacgtccagttataagatta
caagataaaaacattatcctgacaagaatagatcctctgattagggataccagcgtgctt
gtacgtttaaggccagcctgggaggatcttcgcagctacttaattgcaagaggtcgcaag
cgttttgaggtctatgtgtgtacgatggctgaaagagactatgctttagaaatgtggaga
ttgcttgatccagattcaagattgattaattctgttcaacttcatgatcggatggtgtgt
gtaaaatctggtttaaagaagtccttgctaaatgtcttccatgatggttcttgccatcct
ggtatggcattagtaattgatgatcgtctgaaagtttgggatgagaaggatcaattacga
gttcatgtggttcctgcatttactccatattatgctcctcaggcagaggcaaattgttct
atcccggttctgtgtgtagccagaaacgttgcatgcaatgttaggggtggtttcttcaaa
gacttcgatgaagggctcttaccaaggattagcaatgttcactatgaggatgaagtaaat
gatatctcatctgcgccagatgttggcaaatatttgataacagaggatgagaatgccgca
ttagtgaatggaaatagagattcattgccttttgatggtatggcagatgcagaggttgag
aggagaatgaaggaagccaatgctcaagcattccatcaaacagcggggaactttgtcatg
ccagtagcccctgctcagaattttgtttcgtcttcagttgcaccattagccctacctctt
ggcatgatgccacctccattcagccagccagttgttcaaccaggtttttcagattcactg
caaggttctccagctagagaagagggcgaagttcctgagtctgagttagatccggacaca
aggagaaggcttctcatattacagcatggtcaagacacaagagatcctacacctccactc
ccagcaataccaccagtgcaggttccagttcctccagtgcaacctcatgggaattggttt
cccacagaggatgggctaaacccaagtaacctgaatagaggttcagcaggtttcactgta
gaatccgattctatgctctacgagaaaaaacaaccacctcatccttcattctttcatggt
ggggatagtcctatgtcgtctgatagatttggctatcagaaccagaggtttccctctcag
ctaccacacaccgaggatcaccatatccttcagaaccatgcacctccaaaatacagatcc
ttttctggtgaggagctagcagctcggcatgttccctcaagccagagaaacaaccagata
gaatcaggaagacactttgcacaatatgctgggacctctgctggcatattagaggggatt
gctctgaaatgtggatctaaggtggagtacaggtcaacattatgtgatactgcagaacta
caattctctattgaggtttggattgttggggaaaaggttggtgaaggaattggtaggaca
aggagagaagcacagcgccaagctgcagaaatgtctttaagaaacttggccaataaatac
ttgtcatctgatccaaataggttgactgatatgaaagaaaatggtttcagtagcaacaga
aatgtgtttggttactctggaaataccagggatgatatgttgcctttttcaagtacttct
gaggaatctcgctttatgaaaatggaggagaacaattccaggaaaacaggaggttctgtt
gctgctctcaaggaactttgcatggttgagggatacaacttagtttttcaagagcgtcca
tctccagcagatggtttagttgggaaagaatcttatgctcaggtagaagttggtggacaa
attctaggcaaaggagttggattaacatgggaagaggccaagctccaggctgctgatgag
gctcttggaactttaagatccatgctaggtcaacttggtcataagcgatctggctctcca
aggtcattggcaccaaattttaacaagcggttcaagccagattttccaaggaccgtacaa
agagttccttatggaacatattctaggatcgaaggtcatgttccttag
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