Miscanthus floridulus: 136477918
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Entry
136477918 CDS
T10264
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136477918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136477918
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
136477918
SWR1 complex
136477918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
DBINO
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
136477918
NCBI-ProteinID:
XP_066332278
LinkDB
All DBs
Position
8:complement(201801313..201820254)
Genome browser
AA seq
2032 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALEAPREPRRPKVHWDHVLAEMVWLAKEFDSERKWKLSMA
KKIAQRANKSIVDQATKGERKQKEEEHRMRKVALNMSKDVKKFWIKIEKLVFYKHQLEVE
ERKKKALDKQLDFLLGQTERYSTMLAENLVDMPYSQNLENGTSQINQPSHQEEVAEENIN
AAIPDDLDNMEVDDDYESSLDEEPEDDEQTIDVDEAQITEAERNEELAALEAEADLPLDV
ILKMYTKTKVQYVSVSRESSPDSNDMLSNLGSKNLIVDSSNQANGCDHEPAHSSSDDGNS
SEEVDDGQSYAEFVKKSHGKSNGNISSINDQEDEDYIAAEEVKDDETTLSEEEELAKKED
PDHLEEIKLLQKESEIPLEELLAMYRKDGCADHETAELENSPHFIEEVNTDMSLDDQSVN
ILEAKSDIFVDHLSRDVLETEHKALQSEIDVVETEQEALQSEIASEPCAQQNFVEENNLT
DVKAVHGDKSDDVIADAAAAARSAQPTGNTFLTTKVRTKFPFLLKHSLREYQHIGLDWLV
AMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWC
PAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHL
IKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNP
ISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPRKHEHVIYCRLSRRQRNLYE
DFIATSETQATLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMQLSYSVC
MLLDKSPFSQVDLSDMNFVFTQNEFSMSSWEADEVISAFPSSITSRNCDLDIFCSNKDHQ
GSNLTNIFEDIQKALQEERIKESRERAASIAWWNRVRCQKRPVYGTNTRHVLTVNHPVSN
ILDKRNNPLCHMDYSSSLADLVLPSVERFQKMLDVVESFTFAIPAARAPPPVCWCSKGKP
PVFIDPEYREKCMNKFSPTLSPIRSAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKLE
GHRALIFTQMTKMLDVLEEFINLYGYTYLRLDGSTPPEERQTLMQRFNTNPKFFLFILST
RSGGVGINLVGADTVIFYDSDWNPAMDLQAQDRCHRIGQTREVHIYRLISESTIEENILK
KANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHTSLHAEDQEKNCSTTAGASNDVDLA
LSNADVEAAIRQAEDEVDYMALKKLEEEEAVDNQEFSEEVAGRPEEDELVNEEDGKPDEH
INEEHKYNSSDVEKEKHITLSTKRLNDEKALTLAVGDEDTDILADVKQMAAAAAAAGQAS
SSFENQLRPIDRYAMRFMELWDPVIDKAAVNHQVNVEEEEWELDRIEKLKEDLEAEIDED
QEPLSYESWDVDFATTAYRQHVEALTQKQLLEEQERQAQEAAKELEEKNDNMSSHRRKSK
KNKKKTGKFKSLKRVRLSSESEVVLEETSVDTMSIDDNAPSPELISDESPHHYSNKRKKI
MSATEEDSNSRSLKKFKKTTKSSFISEALSPRLKEDLNDSDPKSMARTKSDGRISIPCMP
VKRVIVIKPERLKRKGIWSRDCASDSWTSEEDAVLCGTVHEYGPLWELASDFLHSLPGGS
YRGRYHHPVHCCERYRELFCKHAISATDNSNSEKVPSGTGKAILRVSEDQAQMLVNVTSE
LPNNELLLQKHFMAVISSVWRSKCRRDPCCFMNTYSTALHMFSPVKKPGGSSENWPMVNF
RPSFNLVRKALADAQAKSTLMVIPPPSRNQEYRRNYLELELDFLKHQHAYEEDFPSVINV
SILEPEPSKQAPEPVEQSLLSGLSCRQAENRLRIASEACYDGDSSHWASSAFHVNDATRH
KSGSKSIGKHKAASESGRPTKSKVQKITESHQEGPTVMSNFLRMPAQLLPSTADFHISDS
LSEFGISDSEFHYSEDLLQEVDDLEFFPDQGDSGLLPGIEELEPLSDFTDIG
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaggtccccggtcaaagctagaccatgagacaagagctaggcgtcaaaag
gctcttgaagctccaagggagcctcgacggccaaaagttcactgggaccatgtccttgct
gagatggtgtggctggcaaaggagtttgattctgagagaaaatggaagttgtccatggcc
aaaaagattgctcaaagagcaaataagagcatagttgaccaagcaacaaagggcgagaga
aaacagaaggaggaagaacacagaatgcgaaaagttgcccttaatatgtcaaaggatgtg
aagaagttctggattaaaatagaaaagctggtattttataagcatcaactggaggttgag
gagagaaagaagaaggcacttgataagcaacttgatttccttttaggtcagactgaaagg
tattcgacaatgttggcggaaaaccttgtggacatgccctattcccaaaacctagaaaac
gggacttcgcagataaaccaaccatcccatcaagaagaagtagcagaagagaacataaat
gcagccattcctgatgatcttgataatatggaagtcgatgatgattatgagagctccttg
gatgaagagccagaagatgatgagcagacaatcgatgtggatgaagctcagatcaccgaa
gctgagcggaatgaagaactagctgctttagaggcagaagctgacctaccactggatgtt
attctcaagatgtataccaaaaccaaagttcaatatgtctcagttagcagggaaagcagt
ccagacagcaacgacatgttaagtaacttaggttcgaagaatttgattgtagattcttcg
aaccaggctaatggctgtgatcatgaacctgctcactcttcaagtgacgatggcaattct
tctgaggaagtggatgatggtcaatcttatgctgagtttgtgaagaaaagtcatggtaaa
agtaacggaaatatttcttctatcaatgatcaggaggacgaagattacattgctgctgaa
gaagtaaaggatgacgaaacaactttgtctgaagaggaagaattggcaaagaaagaagat
cctgatcatctggaagagattaagttactgcagaaggagagtgagataccactagaagaa
cttctcgcgatgtaccgaaaggatggctgtgcagatcatgaaacagcggagttggagaat
tcaccccattttattgaagaggtcaatactgacatgtctttggatgatcaatctgtgaac
attttggaagcgaaaagtgatatatttgtggatcacctatccagggatgtgctggaaact
gagcacaaggctctacaatcagaaatcgacgtggtggaaactgagcaggaggctctacaa
tcagaaatcgcatcagagccttgtgctcaacaaaattttgtggaagagaataatctcact
gatgttaaggcagtccatggagataagagtgatgatgtaattgctgatgctgcagctgct
gcaagatcagcacaaccaactggcaacaccttcttgactacaaaagtgcgcacgaaattc
ccattccttcttaagcattctcttcgtgaataccagcatatagggctggattggttggtt
gctatgtatgagaagaggcttaatggaattctagcagacgaaatgggtttaggcaagaca
atcatgactatctccttgcttgcacaccttgcgtgtgagaaggggatatggggtcctcat
cttattgtcgtgccgactagtgttatgctaaattgggagactgaatttcttaagtggtgt
cctgcttttaaaatactgacttattttggaagtgcaaaggagagaaagcagaaacgtcag
ggctggatgaaaccaaattacttccatgtttgcatcacaacatataggcttgtcattcag
gactctaaagtgtttaagcgaaaaaagtggaagtatcttattcttgatgaggctcatctg
ataaagaactggaaatcacagcgttggcagactttgctcaactttaattcaaagagacgt
attcttctgactggaactccactgcaaaatgaccttatggaactttggtccctcatgcat
tttctgatgcctcatgtatttcagtctcatcaggagttcaaggattggttctgcaatcca
atttctgggatggtggaaggccaagataaagtaaacaaagaagttatagatcgattgcac
aatgtccttcgtccatttatactgcgtcgactgaaaagggatgttgagaaacagttacca
aggaagcatgagcatgtcatatattgccgactttctagaaggcaaaggaacttgtatgaa
gattttatcgctacctcagagacacaagcaacactggcaagtgggaattattttggcatg
ataagcatcattatgcaacttagaaaggtctgtaaccatccagatctttttgaaggtcgc
ccaataataagctcatttgatatggctgggattaacatgcagctcagctattcagtctgc
atgctccttgataagagtccattttctcaggtggacctgtctgatatgaattttgtgttt
actcaaaatgaatttagcatgagttcctgggaagctgacgaggtcatctctgcctttcct
tcaagtatcacctccaggaattgtgacttggatattttttgctctaataaggatcatcag
ggaagtaatttgacaaacatttttgaagatattcagaaagccctacaggaggagagaata
aaggaatccagagaaagggcagcttccattgcatggtggaatagagttagatgccaaaag
aggcctgtctatggcacaaacacgagacatgttttgactgtaaatcatcctgtatcaaat
attcttgataagaggaacaaccctttgtgccacatggactattcatcaagccttgcagat
cttgttcttccatctgtggaacgctttcagaaaatgcttgatgttgttgaatcatttaca
ttcgcaattcctgctgctcgagctcctccacctgtttgctggtgcagcaaaggaaagcct
cctgtttttattgatccggaatatagagaaaaatgcatgaacaagttttctcccactctg
tctcctataaggtctgctattgttcgtcgtcaagtctactttcctgataggcgtttgatc
cagtttgattgtgggaagttgcaggaacttgcaattctgttaaggcgtttgaagttagaa
gggcacagggccttgatatttactcagatgactaagatgcttgacgtcttggaagagttc
ataaatttatatgggtatacatatttacgtttagatggttctactcccccagaagagagg
cagactctgatgcagaggttcaacacaaacccaaagtttttccttttcattttgtccact
cgtagtggtggtgtgggaatcaaccttgtaggtgcagacactgtcatcttctatgacagt
gactggaaccctgcaatggacctacaagcacaggacagatgccacaggattggtcagact
cgtgaagttcacatatatagactcattagtgaaagcactatagaggagaacattctcaag
aaagcaaatcagaaacgagctcttgatgatttagtgatacaacgtggtagctacaatacg
gaattcttcaagaaacttgatcctatggagttcttttccgggcacacgtctctccatgcg
gaagatcaggagaagaattgctctacaaccgcgggagcttcaaatgatgtggatctggct
ctgtcaaatgcagatgttgaagcagctattagacaggcagaagatgaagttgactatatg
gctctcaagaagctggaggaggaagaagccgtggacaatcaagaattcagtgaggaggtt
gctggcagaccagaggaggatgaattggttaatgaggaggatggaaaacctgatgagcac
attaatgaagaacacaaatacaactcttctgatgtagagaaggagaagcacataactttg
tctaccaagcgattgaatgatgaaaaggctcttacattggctgttggtgatgaagatact
gacatacttgctgatgtgaaacagatggcagctgcagcagctgcagcagggcaagcaagt
tcatcttttgagaaccagctccggccaattgatagatatgcaatgcgctttatggaactc
tgggatccagtaattgacaaagctgctgtgaatcatcaagtaaatgttgaggaggaagaa
tgggagcttgatcgtattgaaaaactcaaagaggatttggaagcagaaattgatgaagac
caagaaccactgtcttatgaatcatgggatgttgattttgctacaacagcctatcggcaa
catgttgaggctttaactcaaaagcagttgttggaagaacaggaaagacaggctcaggaa
gcagcaaaagagttggaggagaagaatgataatatgagcagtcaccgcagaaagtcaaaa
aagaacaaaaagaagacaggcaaattcaagtccctgaaaagagtgcgtttgtcgtctgaa
tcagaagtcgtactggaggaaacctctgtagatacaatgagcattgatgacaatgcaccc
tcacctgagcttataagtgatgaatcgccacaccattattctaacaagcgtaagaagatt
atgtctgctactgaggaagatagtaacagcagaagtttaaagaagtttaagaaaactact
aagtcaagttttatttctgaagccttgtcacctaggctgaaggaggaccttaatgattca
gatccaaaatcaatggctagaactaaaagtgatggcagaatttccatcccttgcatgcca
gtaaaacgtgttattgtaataaagcctgagagattgaaaaggaagggaatatggtctcga
gattgtgcttcagactcatggacatctgaggaagatgcagttctttgtggaactgtgcat
gagtatggtcctctttgggaattggcaagtgattttcttcattccttgccaggtgggtcc
tataggggaagatatcatcatcctgtgcattgctgtgagagatacagagaactgttctgc
aaacatgcaatatcagcaacagataattctaacagtgaaaaggttccttctgggactgga
aaggctatacttagagtatccgaggatcaagctcagatgttggtgaatgtgaccagtgaa
cttcctaacaatgaattgcttctccagaaacacttcatggctgtaatttcgtctgtctgg
agatcaaaatgtcgccgtgatccctgctgttttatgaatacttactctactgcattacat
atgttttctcctgtgaagaagcctggtggatcaagtgagaactggcccatggtaaacttt
agaccaagcttcaatctagttaggaaagcccttgcagatgctcaggctaagtctacacta
atggtgattccaccaccgtcaagaaatcaggaataccggcggaattatttagaattagag
ttagatttcttgaaacatcaacatgcttatgaggaagacttcccatctgtaataaatgtg
tccatactggaaccagaaccatccaaacaggctccagagccagtggaacaatcgttattg
tctggactttcttgcagacaagctgagaaccgactcaggatagcatcagaagcttgttat
gatggtgatagttctcattgggcatcatcagctttccacgtgaatgatgccacccgccat
aaatctggttcaaagtccataggaaagcacaaagcagcatcggaatctggtagacctacc
aaatccaaagtccagaagattactgaatcgcatcaggaagggccaactgtcatgagtaat
tttctccgtatgcctgctcaactattgccaagtacagctgacttccacattagtgactcc
ctatctgaatttggtatcagcgattctgaattccactactccgaggatctcttgcaagag
gtcgacgatcttgagttcttcccagatcagggtgactctggtctccttcctggtattgaa
gagttagaacctctttcagatttcacagatatcggatga
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integrated database retrieval system
