Miscanthus floridulus: 136478219
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Entry
136478219 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136478219
Membrane trafficking [BR:
mflo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
136478219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
136478219
NCBI-ProteinID:
XP_066332673
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All DBs
Position
8:220591212..220600654
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AA seq
1124 aa
AA seq
DB search
MYLAYGWPQSIPLDPDDSDRVVLLRLLGRLLLAVCPASLHLWSAAQHRVRLARSDRSPES
LAAHGHNAHAVWSPDAKTVAVLTSSFYLYVYKVQHSGKQLIVGGKQVPGLCLASISLIIT
EKVPLANGVAITSNFVCDSKSMLLGLSNGHVQVVSWNAEFSDSFKLGCSVCSSEKPTAVV
DALVFDPPSLRENSNARPAPCCTGNSSIVHVELSVKLRLLVALYSGCRIALCTIGKKGLR
QPGGIRVERWLDTDDAMCTSVASEQQILAVGCSRGVVELYDLAENTRHIRTISLYDWGYS
VEDTGPVACISWTPDNCAFAVGWKFRGLTVWSVSGCRLMCTIRQTGSNSVSSPMVKPSAL
KFEPLMGGTSHIQWDDNGYKLFAVEESLSERVLAFSFAKCCLNRGLSGTTYSHQVLYGED
RILLVQPDDADELKILHLNVPVSYISQNWPVLHVVASNDGMYLAVAGSHGLVLYDLRNKR
WRFFGDVTQEQKIQCKGLLWLGKIVIVCNYVESSNTYELLFFPRYHLDYSSLLYRKPLLG
RPIVMDVFQDYILVTYSPFDVHIFHVMISGELSPASNPVLQLSTVRELSIMSPKSPPVSM
CFIPEQNDKGVLKGDTNGSSDLLSQQPSRCLILRTNGELSVLDMDDGHEHALTNSIELFW
VTCSQFEEKGSLIKEVSWLDYGHRGMQVWYPSHGADPFKQEDFLQLDPELEFDREVYPLG
LLPNVGVVVGVSQRMSFSTAEFPCFEPSPQAQTILHCLLRHLLQRNKIEEALHLANLSAE
KPHFSHCLEWLLFTVFDADISRPSASKNQASQKVDPPKKSLLEKTCDLLRNFPEYMDVVV
SVARKTDGRHWADLFSAAGRSTEMFEECFQQRWYRTAACYILVIAKLEGSAVSQYCALRL
LQATLDESLYELAGELVRFLLRSGRDFENATSDSEKLSPRFLGYFLFRSPYKRQSSDLKS
NSMKELSPHIASVMNILERHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERQGSARLEN
FASALELIGQKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRAEVLVDLFRHDL
RLWKAYSITLQSHDVFREYLDLLNILEEQLSSVSDLTLQNGPLS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtacctggcgtacgggtggccgcagtcgatcccgctggacccggacgactcggaccgc
gtggtcctcctccgcttgctcggccgcctcctcctcgccgtctgcccggcctcgctccac
ctctggtccgccgcgcagcaccgggtccgcctagcccgctccgaccgctccccggagtcc
ctcgccgcccacggtcacaacgcgcacgccgtgtggagccccgacgccaagaccgtcgcc
gtcctgacctcttccttctacctctacgtttacaaggttcagcactcggggaagcaactg
atcgtcggtggcaagcaggtcccggggctttgcctggctagtatatccctaatcatcacc
gagaaggttcctctcgccaatggcgttgctataacgagtaatttcgtgtgtgacagcaaa
agcatgctcctcggactatccaatgggcatgtgcaggtcgtgtcctggaacgctgagttc
tcagacagcttcaagcttggttgctctgtgtgttcgtctgagaaacctactgctgtcgta
gatgcgttggtgtttgatcctcccagtttgcgagaaaactctaacgcaaggcctgctcct
tgctgcacaggcaattcttctattgtccatgttgagctgtcggtgaagctaaggttgctg
gttgctttgtactcaggctgtcgcattgccctctgtactattggtaagaagggattaagg
cagcctggcggcatcagagtggagagatggttggacactgatgatgcgatgtgtacttct
gtggcttctgagcaacagattcttgctgtcgggtgcagtagaggtgttgttgaattatat
gatctggcagaaaacacgcggcatatacgaaccatttcgttgtatgattgggggtattca
gtggaagataccggtcctgttgcctgtatatcttggacgcctgacaattgtgcttttgca
gtcgggtggaaatttaggggacttactgtatggtctgtgtctggatgtcggttaatgtgt
actattcgtcaaactggttcaaattctgtctcatctccaatggtgaaacctagcgctcta
aaatttgagcctcttatgggaggaacatcacacattcaatgggatgataatggatataag
ttatttgctgtcgaagaaagcttgtcagaaagggttcttgctttctcatttgccaaatgt
tgcctaaacagagggctttcaggcacaacatattcccatcaggttctttatggggaagat
cgaatccttttggtgcaaccggatgatgctgatgaactgaagatattgcatcttaatgtt
ccagtttcatacatttcccagaactggccagttctacatgtggtggcaagcaatgatggg
atgtacttggcagttgctggctctcacgggctagtgctatatgatttgcgaaataaaagg
tggcggttttttggtgatgttacacaagagcaaaagatccaatgcaaaggcctattgtgg
ctgggaaaaattgttattgtgtgcaactatgttgaatcgtcaaacacgtacgagcttctc
tttttcccaagatatcatcttgattatagctctttactctaccggaaaccactgcttgga
aggccaattgtcatggatgttttccaggattatatattagttacttacagtccatttgat
gtgcatatcttccatgtgatgatctcgggagaattgtcacctgctagcaatccagtttta
cagctttcaacagtgcgagaactttcaatcatgagtccgaagagcccacctgtttcaatg
tgcttcattcctgaacaaaatgacaaaggagtgctgaaaggagatactaatggatcctct
gatcttttgtcgcagcaaccatcaagatgtttgatcttgcggaccaatggggagctttct
gtgcttgacatggatgatggacatgaacatgctctcacaaattcaattgaactcttttgg
gtcacctgttcccaatttgaagagaagggtagtcttatcaaagaggtttcatggcttgac
tatggtcatcggggtatgcaggtgtggtacccatcacatggagcagatccttttaagcaa
gaggattttttgcagttggatccggagcttgagtttgatcgtgaggtgtatcctcttggt
cttcttccaaacgttggtgtggttgttggtgtttctcagagaatgtccttctcaactgcg
gagtttccatgctttgagccttcacctcaagcccaaacaatattgcattgtttattacga
catctccttcagaggaacaagattgaagaagctttgcacttggcaaatttgtcagcagaa
aagcctcacttctctcactgtttagagtggcttctgtttacagtatttgatgcagatata
tcaaggccaagtgcttcaaaaaatcaggcttcacaaaaagttgatcctcccaagaaatct
cttcttgagaaaacttgtgacctgctacggaattttcctgaatatatggatgttgtagtc
agtgttgctaggaaaactgatggtcgacactgggctgatcttttctctgcagctggacga
tccacagagatgtttgaggaatgcttccaacagaggtggtacaggactgctgcttgctac
atactggtcattgctaagctggagggctctgcagtcagccagtattgtgcactccgtttg
ctacaagctacacttgatgagtctttgtatgagcttgctggggagttggttcgcttcttg
ctaagatccggaagagattttgagaatgccacttcagactccgagaagctctctccaaga
tttctaggctattttctgttccgttcaccatataagaggcaatcttctgatttgaaaagt
aactcaatgaaagaacttagtccacatattgcctctgttatgaacattctagagcgccat
gctagctatttgatgtctggcaaggagctttctaaactcgttgcttttgtcaaggggact
caatttgatcttgtggaatatctacaacgagaaaggcaagggtctgctcgtctggagaat
tttgcttctgcacttgaactgattggacaaaagcttcaaatggatacactgcaaagccga
cttgatgcagagttccttctagctcatatgtgttcagtcaagtttaaggaatggatcgtg
gtgctagctactttattgaggcgtgcagaggttttggtggatctctttcggcatgatttg
cgattgtggaaagcatatagcattactctacagtcacatgatgtattcagagaatatctt
gaccttcttaatatcttggaggagcagctttcgtctgtctctgatcttacattgcaaaat
ggaccattgtcatga
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