Miscanthus floridulus: 136478266
Help
Entry
136478266 CDS
T10264
Name
(RefSeq) serine/threonine-protein kinase VPS15-like isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
136478266
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mflo01001
]
136478266
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136478266
Enzymes [BR:
mflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
136478266
Protein kinases [BR:
mflo01001
]
Serine/threonine kinases: Other
VPS15 family
136478266
Membrane trafficking [BR:
mflo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
136478266
Autophagy
Autophagosome formation proteins
PI3K complex
136478266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
Pkinase
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WDR55
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
HEAT
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
PK_Tyr_Ser-Thr
Beta-prop_EML_2
WD40_Gbeta
PEP5_VPS11_N
Beta-prop_EML
Kinase-like
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Cohesin_HEAT
Beta-prop_WDR41
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Tti2
APH
DUF7691
TCAD9
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
136478266
NCBI-ProteinID:
XP_066332730
LinkDB
All DBs
Position
8:complement(222155574..222164231)
Genome browser
AA seq
1479 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRGRFLKSVRCKHDEGLLLVKVYFKRA
GEPIDLKEHERRLERIRNAFKGIEGSHVWPFQVWLQTDKAAYLLRQYFFNNLHDRLSTRP
FLSQIAKKWLAFQLIHAVEQSHSKGICHGDIKCENVLVTSWSWLYLADFASFKPTYIPDD
DPSDFSFYFDTGGRRRCYLAPERFYEHGGESQVAADAPLQPSMDIFSLGCVLAELFLEGQ
PLFELSQLLAYRRGQYDPIHTLEKIQDTGIRDMILHMIQLDPKKRLPCRSYLQKYESVVF
PFYFSKFLHKFFSDIVPLDSDARVEKTQENFEKIHEIMMGSSTIEQIERSTSCEHSEPSG
RKGMGGEILNSPGDSRNSTSVVKKNTPVGHQHIVGDINFLLKEVESRSNNTSTKVTKDID
HFVAPSIPCASGNQSSQLVNPAGRQIGTGLMGRNNVVSHVKISKSHLPSLVAAYDDQSDT
YSFDIFQQMDSKVSCEGMVLLASLLCSCIRSVKKPELRRASLILLKFSSTYIDDDSRLQL
VVPYVIAMLSDPSAIVRCAALETLCDVLCLVQDFPISDAVIFPEYILPMLSLLPDDTEES
VRVCYASNIHKLALTAYRFLLRSRSIADIRPLDESVVAPRSQSADLPVKKQDDFFRQLAE
LRKSIYEIVQDLVMGQKQTPNTRRALLQDIGYLCYFFGHRQSNDFLLPILPAFLNDHDEQ
LRAVFFGQIVYVCYFIGARSVEEYLLPYLEQALSDGMEAVLVNALHCLTMMCRSGYLRKR
VIVGLLVKVLPLLRYPINWVKQSAVRFVAACSESLGSVDTYVYLSPHLRQFLHREPPSLA
SETALLSCLKSPLPKSIFYQALEDAQDIGDILLKSSGKKDQIVHGGRYPGTAQSGSSANL
EDIGRLKGPNISSNMSLDVKDSVSFDKSLYSGFALQASAANSSFYDGLSKGIPSYSFCTD
KRGLGETHMLPDSSVYKASIRLPWLEPNRPGVQTRDDHFSSKRRELSINDSMKSSSSLQG
DSTPNSDTGGLPFSRSAVNLETGWKPRGILVAHLQEHRSSVNDIAVSNDNTFFVTASDDS
SIKIWDTRKLEKDIAFRSRLTYSMGNSRALCTTMVHGTSQVIVGASDGTLHLFSVDCARS
IGSVVERYAGIVDVKRNDIKEGAILSVVNCSSDSFSPTVLFSTEHCGIHKWDTRTNSESW
SFKSSPEEGYISALVVGQCGNWFISGSSRGVLTLWDNRFLLPVNSWNYSTVSPIEKLCLL
IPPPSSISSAGRPLVFVAAGCNEVSLWNAENGSCHQMFRTASTDNEAVMSKAPSRPVNKP
IIKDIRRAGNYKYRIDELNDPPVRHPGIRSLLPLPGGDLLTGGTDLKIRYWDQARPEQSF
CIAGPSAKEVRSAKGDILEKAVGNDECYDIRSSFGVQVVQEMYKQSTTVSGLTPKTQLAV
AAADSAGCHRDAILALASFNLSSQRLISASRDGAVKVWK
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcgcggacgacgcaggcgtcggcgacggagtactacctccacgac
ctgccgtccacctacaacctcgtgctcctcgacgtcgtcagccgcggccgcttcctcaag
tccgtccgctgcaagcacgacgaggggctgctcctcgtcaaggtctacttcaagcgcgcc
ggcgagccaatcgaccttaaggagcacgagcggaggctggaacggattaggaacgcgttc
aaggggatcgaggggtctcacgtatggcccttccaggtttggctgcaaacagataaggca
gcatatctcctgagacagtacttcttcaacaacctgcacgatcgactgagtacacgccct
ttcctcagtcagattgcaaagaaatggcttgcctttcagttaattcatgcagtggagcag
agccatagtaagggaatttgccatggtgacataaaatgtgagaatgtgctcgttacttct
tggagttggctatatcttgcggactttgcatcattcaagccaacgtatatcccggatgac
gatccgtccgatttctcattctatttcgacactggaggaagacgaagatgctatctagca
cctgaaagattctacgaacatggtggtgagtcccaagttgcagcagacgcacctttgcaa
ccatctatggatatattttctcttgggtgcgttcttgctgaacttttccttgaaggccag
ccactttttgagctttcacaacttctggcttatcggcgtggtcagtatgaccccatacat
accctagaaaagatacaagatactggtatccgtgacatgatacttcacatgatccagttg
gaccccaaaaaaaggctaccatgtcgaagctatctgcagaaatatgaatctgttgtgttc
ccattttatttttcaaagtttctgcacaagttcttctcggatattgttccacttgactcc
gatgccagggttgaaaagactcaagaaaattttgagaagatacatgaaataatgatgggc
agctcaacaattgaacaaattgaaagatctacatcgtgtgagcatagtgaaccatctggg
agaaaaggcatgggaggggaaattttaaactcaccaggagattctagaaacagcacatcc
gtagttaagaaaaatactcctgtaggccatcaacatattgttggagatatcaattttctc
ctcaaagaagtggagagcaggagtaacaatacaagcacaaaggtgacaaaagacattgac
cattttgttgcaccaagcattccctgtgcaagtggtaatcagtcctcgcagctagttaat
ccagcaggaaggcaaattggaactggtttgatgggtcggaacaatgttgtatctcatgtg
aagatctcaaagagtcatttaccctccttggtggctgcttatgatgaccaatcagatacc
tatagttttgacatttttcagcagatggactccaaggtgagctgtgaaggcatggtcttg
cttgcctcattactctgctcatgcatacgcagtgtgaaaaaacctgagctaagaagagcc
agtctcattcttctgaagttctcgtccacatacatagatgatgatagtcgcttacagcta
gtggttccctatgtgattgcgatgctttcagatccgtccgccattgtccgctgtgctgct
ttggaaaccttatgtgatgttctttgtcttgtgcaagattttcctatcagtgatgctgtc
atattccctgagtacatcctcccaatgctctctttgctccctgatgatacagaagagagt
gttagggtttgctatgctagcaacattcataagctggctttaacagcctataggttccta
cttcgttctcgtagcatagcggatattcgacctctggatgaatcagtggtagctcccaga
tcacagtctgcagatttaccagtgaagaagcaagatgatttttttcgccagcttgcagaa
ctgaggaaatctatttatgagatagtgcaagatttggtgatgggacaaaagcagacacct
aatacccgtagagctcttctgcaggatataggttatttgtgttacttctttgggcacaga
caaagtaacgatttccttcttcctatacttccagcatttctaaatgatcatgatgagcag
ctccgcgcagttttctttggccagattgtctatgtttgctattttattggagcaaggagt
gttgaggaatatcttttgccatatcttgaacaggcactaagtgacggtatggaggctgtc
cttgtaaatgcacttcattgcttgaccatgatgtgcagaagtggttatttgagaaaaaga
gtaattgttggtctattggtaaaggttctccccctgctccggtatccaatcaattgggtt
aagcagtctgctgtaagatttgttgctgcctgcagcgagagcttaggatctgtagatact
tatgtgtacctttctcctcatctaaggcagttcctacacagggagccaccttcattggcc
tctgaaactgctcttctttcatgtcttaagtctccgctaccaaaatcaatcttctaccaa
gctttagaggatgctcaggacattggagacattttactgaagagcagtggcaagaaagat
cagatagtacatggtggaagataccctggtacagcacaaagtggatcctcggccaacctt
gaagatattgggcgactgaaaggccctaacatttccagcaacatgtctttggatgtcaaa
gactccgtttcttttgacaaatcactatattctggttttgctctacaagcatctgctgca
aatagctccttttatgatggcttatctaaaggaataccatcatattctttttgtactgat
aagcggggtttaggagaaacacacatgctccctgattcatcagtgtataaagcttcaata
aggctaccttggttggaacccaaccgtcctggcgtgcagactagagatgatcatttcagt
agcaagcggcgagagttgagcatcaatgactctatgaagagcagttcctctttgcaaggg
gatagcactccaaactctgacactggaggattgccgttctccagatcagcagtgaacctg
gagactggatggaagcctcgtggaattctagtggcacatctccaggagcatcgctcgtct
gtcaatgacattgccgtgtcgaatgacaataccttttttgtgactgcttcagacgactca
agcatcaaaatatgggatacaagaaagttggaaaaggacattgccttcagatctaggtta
acatacagcatgggtaatagccgagctctatgtacgacaatggttcatggtacttcacag
gttattgttggtgctagcgatggaacattacacttgttttctgtggattgcgcacgtagt
attgggagtgttgtggaaaggtatgctggaattgtcgatgtaaaaaggaatgatattaaa
gaaggcgcgattctcagtgttgtaaattgttcatcagacagctttagcccaactgttctt
ttcagcactgaacattgtggcatccataaatgggatacaagaacgaactcagaatcttgg
tcatttaaatcctctccggaggagggctatatatcggcacttgttgtgggccagtgtgga
aattggttcatctcaggttcttcaagaggcgtccttacattgtgggacaataggttttta
ctgcctgttaactcgtggaactattcaacagtaagccctatagagaaattgtgcttgctt
atacctccaccaagttcaatatcttctgctggaaggccattagtttttgtcgccgctgga
tgcaacgaagtttctctgtggaatgctgagaatggaagttgccaccagatgtttagaaca
gcgagcactgacaatgaagctgtgatgtcaaaggcgccatcaaggcctgttaacaagcca
atcatcaaagatataaggagagcaggcaattataagtacagaattgatgaattgaatgac
ccacctgtacgccatccaggcatacgctctttgctgcccttaccaggtggtgatctatta
actggaggaacagatttgaagattcgttactgggatcaagccaggcctgagcaaagcttc
tgtattgctggtccctcggcgaaagaagtccgttcagcaaaaggagatattttggagaaa
gcagttggaaacgatgagtgttacgatataagatccagttttggagtacaagttgtgcag
gaaatgtacaaacagagtaccacggtctctggtttgacgcccaagactcagcttgcggtg
gcagccgcagattctgccgggtgccatcgtgacgcaatactcgcgctggcatccttcaac
ctgtctagccagagattgatatcagccagtagagacggtgctgtcaaagtgtggaaatag
DBGET
integrated database retrieval system
