Miscanthus floridulus: 136478477
Help
Entry
136478477 CDS
T10264
Name
(RefSeq) protein argonaute 1C-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136478477
03036 Chromosome and associated proteins [BR:
mflo03036
]
136478477
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136478477
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136478477
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136478477
microRNA pathway
RISC loading complex
136478477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
136478477
NCBI-ProteinID:
XP_066333042
LinkDB
All DBs
Position
8:complement(228986958..228994903)
Genome browser
AA seq
1039 aa
AA seq
DB search
MGSRRGRQHPGAGHAAQPPQPGGRGAARAQQPPQPAGRGGGGRGGSQQQGRGGGRTSRVD
EAQHQQHGRGGHARGGSAAGRPQQYPRGATPLQGAAPSSSSHLAPELRQAMEGAPRELAP
QAPPGPSQPSPEAPPPVQPREEHGPAEPSAGQEIVPTAPPQSSKSFRFPLRPGKGSIGTR
CLVKANHFFAELPDKDLHHYDVSITPEVTSRVVSRAIIKELVNLYKQSYLGGRLPAYDGR
KSLYTAGPLPFTSQEFHITLFDDDGGPGSERRHRNFKVVIKFAARADLHHLELFLAGRHA
EAPQEALQVLDIVLRELPSSRPRYAPFGRSFFSPDLGRRQPLGDGLESWRGFYQSIRPTQ
MGLSLNIDMSATAFIEPLPVIEFVAQLLNCEIHSRPLSDAERVKIKKALRGVKVEVTHRG
NMRRKYRISGLTTQATRELTFPVDEGGTIKSVVQYFQETYGFAIQHTYLPCLQVGNQQRP
NYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQHPRDRERDIIRMVKQNAYDKDDYAQE
FGIKISDRLASVEARILPAPRLKYNETGREKDCLPRIGQWNMMNKKMVDGGKVRSWICVS
FARNVQDSVVRGFCHELALMCQASGMDFAREPVLPPLYARPDQVERALKARYHDAMNVLG
PKHKELDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNKQILANLALKIN
VKVGGRNTVLLDAVSRRIPLVTDRPTIIFGADVTHPHPGEDRSPSIAAVVASQDWPEVTK
YAGLVSAQAHRQELIEDLYKVWQDPQRGTVSGGMIRELLVSFKKSTGQKPQRIIFYRDGV
SEGQFYQVLLYELNAIRRACASLEANYQPKVTFVVVQKRHHTRLFAHNHNDKNSIDRSGN
ILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQTLTNNLCYT
YARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSVASGPAGRGPQSASHSTRASGGA
AVRPLPALKDNVKRVMFYC
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgaggaggggaaggcaacatcctggtgctggccacgccgcgcagcctccgcag
ccgggcgggagaggcgctgctcgtgctcaacagcccccgcagcctgcaggaagaggagga
ggaggtcgtggagggagccagcagcaggggcgaggtggaggccgcacgtctcgcgttgat
gaggcccagcaccagcagcatggcaggggcggccacgctcgtggcgggagtgctgcgggg
cgcccgcagcagtacccacgtggtgctacacctctgcagggggctgccccgtcgtcatcc
agccatttagctcccgagctgcgccaagcaatggagggggctcctcgtgagcttgcacca
caagcgccaccaggtccttcgcagccatcgccagaggctcccccgcctgttcagcctaga
gaggagcacgggccagctgagcccagtgcaggccaggagattgtgcctactgcacctcca
caatcaagcaagtcattcaggtttcctttgcgcccaggaaagggcagtattggcaccagg
tgcctggttaaggccaaccatttctttgctgagctgccagacaaggatcttcatcactat
gatgtctcaatcacaccggaagttacctcaagggttgttagtcgggccataatcaaggag
ctggtcaatctctacaagcaatcttacttgggtgggaggctaccggcttatgatggtagg
aagagcctgtacacagccggcccactgccgtttacttcacaggaatttcatatcacttta
tttgatgatgatggtggccctggttccgagaggcgacataggaattttaaagtagtcatt
aaatttgctgcacgagctgacctccaccacctcgagctgtttttagctgggaggcatgca
gaagctcctcaagaggcattgcaggttctggatattgtgctgcgggaactgccttcatca
aggccaaggtacgcaccatttggccggtctttcttttcacctgatttgggccgaaggcag
ccccttggtgatggattagaaagctggcgtggattttaccagagcattcgtcctactcaa
atgggcttgtcactcaacattgatatgtcagcgacagctttcattgagccattgcctgta
attgaatttgttgcacagctgctgaattgtgaaattcactctaggccactctcagacgcg
gaacgggtgaagatcaagaaagccttgcgaggagttaaggtggaagttactcatcgtgga
aacatgcggagaaagtatcgaatatctgggttaacaactcaggcgactcgagagttaacc
tttcctgttgatgaagggggtacaataaagtcagttgtacaatactttcaagagacatat
ggctttgccatccaacacacctaccttccttgccttcaagttggcaatcaacagcgccca
aattacttgccaatggaggtctgcaaaatagtggagggacagaggtactccaagagatta
aaccagaatcagatcagagctcttttggaggagacatgccagcacccacgcgatcgtgag
cgtgatataattcggatggttaaacagaatgcctatgacaaggatgattatgcacaagag
tttggcattaagattagcgatcgtctggcatcagttgaggcacggattttgccagctcca
cggcttaagtacaatgagactggtcgagagaaggactgcttacctaggattggtcagtgg
aatatgatgaacaagaaaatggtagatggtggtaaggtcagaagttggatatgtgtcagt
tttgctcgcaatgtgcaagacagtgttgttcgtgggttctgtcatgaacttgcactgatg
tgccaagcgtcaggaatggatttcgctcgggagcctgttcttccacctctatatgcacgt
cctgatcaagtggagcgagctctgaaagctaggtaccatgatgccatgaacgttcttgga
cccaaacacaaggaacttgatttacttattggaatactacctgacaacaatggctcactt
tatggtgatttgaagcgtgtctgtgaaatagatcttgggatagtttcacagtgctgttgc
acaaagcaggttttcaaaatgaacaaacaaattcttgcaaatcttgctctgaagattaat
gtcaaggttgggggcaggaacaccgtgctgttagatgccgtctcaaggcgaattcctctg
gtaactgatcgacctacaatcatatttggtgctgatgtgactcatcctcatcctggtgag
gacagaagtccctcaattgctgctgttgtggcctcccaagattggccagaggtgacaaag
tatgctggactagtttctgctcaagctcatcggcaagagttgatagaggatttgtataag
gtctggcaagatccacagagagggacagtaagcggtggaatgataagggagctacttgta
tccttcaaaaaatcaactggtcagaagccccagcgaataatattttacagggatggtgtc
agtgaaggacaattttatcaagttctgttgtatgagctcaatgcaatccgaagggcctgt
gcctccctggaagcgaactaccaaccaaaggtgacttttgttgtggttcagaagcgccat
catactagattatttgctcacaaccacaatgataagaattcaattgacaggagtggaaac
atactcccaggtactgttgtagattcgaagatctgccatcctactgaatttgacttctac
ttgtgtagccatgctggcattaagggcactagccgtccagctcattatcatgtcttgtgg
gatgaaaacaacttctctgctgatgagttgcagactcttacaaacaacctctgttacact
tatgcaaggtgcacccgctctgtatcgatcgttccaccagcgtattatgctcacctggct
gccttcagggctcgtttttacatggaaccagagacttctgacagtggttcggtggcaagt
ggtcctgcaggccgtggacctcagtcagcatcccatagcactcgggcctctggtggtgca
gctgttaggccacttccagctctgaaggataacgtaaagagggtcatgttctactgctga
DBGET
integrated database retrieval system
