Miscanthus floridulus: 136478861
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Entry
136478861 CDS
T10264
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mflo Miscanthus floridulus
Pathway
mflo04144
Endocytosis
Brite
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
136478861
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136478861
NCBI-ProteinID:
XP_066333122
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Position
1:35933484..35942394
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AA seq
803 aa
AA seq
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MAAASAAVRMLPDGGADDEERWLAEGIAGVQQNAFYMHRALDSNNLKDALKYSAQMLSEL
RTSRLSPHKYYELYMRAFDEMKKLEMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLC
TVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDA
ESINDAVEFVLQNFIEMNKLWVRMQHQGPVREKEKRGKERNELRDLVGKNLHVLSQIEGV
DLDMYKETVLPRILEQVVNCKDDLAQFYLMDCIIQVFPDEYHLQTLETLLSAFPQLQPSV
DIKTVLSQLMDRLSNYAASSPEVLPEFLQVEAFAKFSNAIGKVIEAQPDMPVVGAVTLYV
SLLTFTLRVHPDRLDYVDQVLGACVKKLSGKAKLEDSRATKQIVALLSAPLEKYSNIVTA
LELSNYPRVMDYLDNATTKVMAVVIIQSIMKNTTCISTSDKIESLFDLIKGLIKDMDGAQ
DDELDEEDFKEEQNSVARLIHMLHNDDPEEMLKILCTVQKHILQGGPKRLTFTVPSLVFS
ALKLVRRLQGQDGDVTGEDVPATPKKIFQILHQTIEALSCVPSPELALRLYLQCAEAAND
CDLEPVAYEFFTQAFILYEEEIADSKAQITAIHLIIGTLQRMNIFGVENRDTLTHKTTGY
SAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAAQQMASATRGSS
GSVTLFIEILNKYLYFFEKGIPQITNTVIQDLIELIRTEKQSDNSVADPSTEAFFSSTLR
YIEFQKQKGGSIGEKYEQIKTSS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcatcggcggcggtgcggatgctccccgacggcggtgctgacgacgaggag
cggtggctcgccgagggcatcgccggcgtccagcaaaacgccttctacatgcaccgcgcc
ctcgattccaacaacctcaaggacgcactcaagtactcggcgcagatgctctccgaactg
cgcacctcgcgactatcgccgcacaagtactacgagctctacatgagggcgtttgatgag
atgaagaagctggagatgttcttcagggaggagactcgccggggcagctgctctgtggtt
gatctgtacgagcttgtgcaacatgctgggaatgtcttaccgagactctatctcctctgc
acggtgggatctgtgtacatcaaatcgaaagaggctcctgctaaagatgttcttaaagat
ctcgttgaaatgtgccgaggcattcaacatcctcttcgtggccttttcctgagaagttac
ctttctcaaataagcagagacaaattgcctgatattggttctgagtatgaaggggatgca
gaaagtattaacgacgcagttgaatttgttcttcagaatttcatagaaatgaacaaactc
tgggtccggatgcagcatcaggggcctgtccgagaaaaggaaaagcgcgggaaggaaaga
aatgaactgcgtgatctggtaggcaaaaaccttcatgttctaagccagattgagggcgtt
gaccttgatatgtacaaagaaactgttcttccaaggatattagagcaggtggttaattgt
aaagatgaccttgcacagttctacctgatggactgcataatccaagtctttccagatgaa
tatcatttacaaacattggaaactttattgagcgcatttccccagcttcagccaagtgtt
gatatcaaaacagtactctctcaacttatggacagattgtctaactatgctgcctcaagt
cctgaagtgttgccagagttcttgcaagttgaagcttttgctaagttcagtaatgctatt
ggaaaggtgatagaagcccaacctgacatgccagttgttggagccgtaactctatatgta
tcacttctgacttttactctccgtgtacatcctgatcggcttgattatgtagaccaagtg
ctgggtgcatgtgtcaagaaactttcaggcaaagcaaaacttgaagatagcagggcaaca
aagcaaattgttgcacttcttagtgctcccctggaaaaatatagcaatattgttactgca
ttagaactttcaaactatcctcgggttatggattatcttgataatgctacaaccaaagtg
atggctgtggtaataattcaaagcataatgaaaaacacaacctgcatatctacttctgac
aagattgagtcactattcgatttaattaaggggctgataaaggatatggatggggctcaa
gatgatgagcttgatgaagaagacttcaaggaggaacagaactctgtagcgcgtctcatt
cacatgttgcacaatgatgatcctgaagagatgctgaagatcttatgtactgtacagaag
catatacttcagggaggccccaagcgtttaactttcactgtgccttcgttagtattctct
gctcttaagctggtcaggcgattacaaggccaagatggagatgtcactggggaggatgtt
cctgcaactccaaagaaaatattccagatattgcatcagactattgaagcactttcttgt
gttccttccccagagttagctctgagactatatttgcagtgtgcagaggctgccaatgat
tgtgatctggaaccagttgcttatgagttctttactcaagcgttcatcttatatgaagaa
gaaattgcggattcaaaggctcagatcactgcaattcacctgataattgggacccttcag
cggatgaatatatttggggtggaaaatagagacaccctcactcacaagacaacagggtac
tcagcaaaacttctcaagaagcctgatcaatgccgagcagtctatgcgtgttcacatctt
ttctggactgatgaccaagatggaataatggatggtgaaagggttctcctttgtttgaag
cgtgccttgagaatcgcaaatgctgctcaacagatggctagcgctacaaggggaagcagt
ggatccgtaaccctatttattgaaattttgaacaagtacttgtacttctttgagaaagga
attccacagatcacaaatactgtgattcaagatttgattgaattgattagaacggagaag
caaagtgataactctgtagccgatccatcaacagaggcattcttttctagcactttgcgg
tacattgaatttcagaagcagaaaggtggaagcataggcgaaaaatatgaacaaataaag
acaagttcatga
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