Miscanthus floridulus: 136479102
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Entry
136479102 CDS
T10264
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
136479102
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
136479102
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
136479102
NCBI-ProteinID:
XP_066333171
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Position
9:4508191..4519003
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AA seq
686 aa
AA seq
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MAATAPDVVRSLLRTAAAAIVLLVAVGASTVLHLAAAAVPPPDAAQHGVTVSVSQRQVIV
DNGIVQVTLSTPQGHITNVRYNGEQNLLYYTGGANTAGYWDVLWDYPGSGRPGMLNMLDG
SELRVISSSEENVELSFRSNYNPSLPNSVRLNIDKRFVMLKGGSGFYCYAILEHASSYPA
LIVAESRITFKLNTDMFNYMAISDDIQRYMPSAADRVAPRCAPLAYKEAVLLVDPMEPQF
KGEVDDKYQYSLDNKDNAVHGWIGGGRTRTNPAMGFWVITPSNEFKSGGPMKRELTSHVG
PVSMAVFLGTHYTGIDIMLNLGDGEYWKKVLGPVFIYLNSNPNNGSDIRALWDDAKAQSR
AEAGKWPYSFPESPDFAKAGDRGTVTGTLLVRDAFASKGGDVPAATAFVGLAAPGGQPGS
WATQCKGYQFWNTAAASGRFSIGGVRAGTYSLYAWVPGFLGDYVHTSTVTVTPGGAVDLG
TLVFEPPRSGPTLWEIGVPDRTAAEFFVPDADPRYASKLFMGKDRYRQYGLWERYAELHP
VGNDLVFTVGQSDYSKDWFFAHVTRMIGNVSTPTTRQIRFNLDHVVANGTYTLRIALAAA
QMSRLTVRVNGRATREAVFSTPEFGEGNAIARHGIHGGVQWSFEFPIRGYLLQQGKNSIS
ITQTMAFGPFLGVIYDYLRLEGPPPA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacggcgcctgatgttgtgaggtcattgttgcggacggcggcagcggccatc
gtcctgctcgtcgccgtcggagcgtcgaccgtactgcacctggcagccgccgcagtgcca
ccgccggacgcagcccagcatggtgttacagtaagcgtcagccagcgccaggtaattgtg
gacaacggcatagttcaagtgacgctttcaacgccgcagggacacatcaccaacgtccgc
tacaacggcgagcaaaaccttctgtactacactggcggggccaacactgcagggtattgg
gacgtgctctgggactatcccggatcaggtcggccaggaatgctcaacatgttggacggt
tcagagttgagggtaatatcctcaagcgaagagaatgtggagctttctttcaggagcaac
tacaatccgtcgctcccaaacagcgtcaggctaaacatcgataagaggtttgtgatgctg
aaaggcggctctggtttctactgctacgccatcttggagcacgccagcagctatcctgct
ctcatcgtcgccgagtctcggatcaccttcaagctcaacacggacatgttcaactacatg
gcgatctcagacgatatacagaggtacatgcccagcgcagcagacagagttgcgccacgt
tgcgctccactggcctacaaggaggccgtcctgctggtcgaccccatggagccacagttc
aagggggaggtggacgacaagtaccagtactcgctggacaacaaggacaacgccgtccat
ggctggatcggcggcggccgcacccgcaccaacccggccatgggcttctgggtcatcaca
cccagcaacgagttcaagagcggcggccccatgaagcgagagctcacctcccacgtcgga
cccgtctccatggccgtgtttctagggacgcattacactgggatcgacataatgctgaac
ctgggcgacggcgagtactggaagaaggtgctgggcccggtattcatctacctcaactcc
aaccccaacaatggcagcgacatccgagctctctgggacgacgccaaggcgcagtcgcga
gcggaagccggcaagtggccgtacagcttcccggagtcgccggacttcgccaaggcgggc
gacaggggcacggtcaccggcaccctcctggtcagggacgcgttcgcgagcaagggcggc
gacgtgcctgctgcaacggcgttcgtcgggctcgccgcgcccggcgggcagcctggctcc
tgggcgacgcagtgcaagggctaccagttctggaacacagcggcggccagcggccggttc
agcatcggcggcgtccgggctgggacgtacagcctctacgcgtgggttcccgggttcctc
ggagactacgtgcacacctccacggtgacggtgacgccagggggcgccgttgaccttggc
acccttgtgttcgagccgccgaggtcgggcccgacgctgtgggagatcggcgtgccggac
cggaccgccgcggagttcttcgtccccgacgccgaccccagatacgccagcaagctcttc
atgggcaaggataggtacaggcagtacggcctgtgggagaggtacgccgagctgcacccg
gttggaaatgacctcgttttcacagttggtcagagcgactactcaaaggactggttcttc
gcacatgtcacaaggatgattggcaacgtcagtacaccgacgacacggcagatacgcttc
aacctcgaccacgtcgtggcaaacggcacctacactctgcgcattgctcttgcagctgct
caaatgtccagactcacggtgcgcgtgaacggcagagcgactagggaagccgtgttcagc
acgccggagttcggcgagggcaacgccatcgcgcggcacggcatccacggcggcgtgcag
tggagcttcgagttccccatcaggggctacctgctgcagcaaggcaagaacagcatcagc
atcacgcagacgatggcgttcgggcccttcttgggggtcatatacgactacctcaggctg
gaagggcctccgccggcgtga
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