Miscanthus floridulus: 136479214
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Entry
136479214 CDS
T10264
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136479214
03460 Fanconi anemia pathway
136479214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136479214
03036 Chromosome and associated proteins [BR:
mflo03036
]
136479214
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136479214
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
136479214
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
136479214
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
136479214
FA (Fanconi anemia) pathway
Downstream FA components
136479214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
136479214
NCBI-ProteinID:
XP_066333247
LinkDB
All DBs
Position
9:complement(10778917..10786249)
Genome browser
AA seq
931 aa
AA seq
DB search
MSAGFHANTSTKITVKRANPEHRLGVASTSAISSGTHKGTYPTENPTHMDRHQQFGFSKS
TTSDAGKHSIRFSTAGGRSMAISADALQRAKSLLGDSDLVVSPNDSIGHSLASAIEKLPK
STISLKGNVSNLSHGTSAIGYAVPDAPVTKKSANQFHMGRDRPINEIPKVPKPPSRCLSE
GNNVSNAKDKTQWHHMPAGPLVDITNYMATCSGNTDRLANGKRIFGGRNSISPFKRPRSS
RFITPIKNNKLSSAGESIVPPMQISPCRTMLSARYPFQHQRKNYKEYFGGPPCFKYLTEH
VTDDVKLMDARRAEKFRFQHTDTGAEEFQKMLLRCGASLSCATKEWVSNHYKWIMWKLAS
LERCYPTRAAGKFLTVDNVLEELKYRYDREVNHGHRSAIKKILEGNASPSLMMVLCISAI
YSCPDQNNNKLEVNKVDTNEDNNDNQSLSATNRNMSANIELTDGWYSLDASLDMTLLEQL
EKRKLFVGQKLRIWGASLCGWSGPVSFHEAPGTVKLVVHINGTYRARWNDALGFCKHVGL
PLAFRCIKASGGRVPRTLVGITRIYPVLYRERLPDGRSVVRSERMERKALELYHQRVSKI
TEDILFEQQENCDSTDDNEEGAKILKMLEHAAEPEFILAGMTPEQLKLFSSYIEKQKIVK
QTEVSKKVEKALEVAGLSSRDVTPFLKVRVIGLVNKHSASTSSNKEGLITIWNPTEMQKH
NLVEGQAYSVTGLVPSKYCTKILYLHARGSSTTWKPLASAQTTDFKPFFTPHKAIELLKF
GEVPISSEFDIAGLILYVGNTYLCSNKKKQWLFLTDGSKFISGQGCEEQDCLLAVSISSA
TTDEDSALFSYTLSGNTVGFSNLVKRQKDETRQIWVAEATESSSYTLSSEIPRKSHLKEA
AASAERWASRSYHKIQELKERILCIVGNAGV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggtttccatgcgaacacatccacgaagataactgttaagcgggcaaatcca
gaacacaggcttggtgttgcatctacaagtgcaatttctagtggcactcataagggtact
tatccaacagaaaaccccacacatatggatagacatcagcagtttggattttctaagagt
actacctcagatgctggtaagcattctatcaggttcagcactgcaggtggccgatcaatg
gctatctctgctgatgcactacaacgtgcgaaaagccttttgggtgattcagatttagtg
gtttctccaaatgattcaataggtcactctttggcatcagctatagagaagctaccaaaa
tcaactatttctctgaaaggaaatgtatctaacctatcgcatggaactagtgcaatagga
tatgctgtacctgacgcccctgtgactaaaaaaagtgctaatcagtttcatatgggaagg
gatcgtccaatcaatgaaattcctaaggtccccaagcctccctccagatgtttatctgaa
ggcaacaatgtgagtaacgctaaagacaagacccagtggcaccatatgccagctggacca
ttggttgacattactaactacatggctacatgttctggaaatacggaccgcttagcaaat
ggaaagagaatatttgggggaagaaactccatatctccattcaaacggccccgttcttcc
aggttcatcacgccaataaaaaacaacaaactatcttctgctggagaatccatagtgcca
ccaatgcagatcagtccctgtaggacaatgctatctgcacgttatcctttccaacatcaa
aggaaaaattacaaagaatattttggtggtcctccttgcttcaaatatttgacggaacat
gtaactgatgatgtgaagctcatggatgcaagaagagctgagaagtttaggtttcagcat
acggatactggtgcagaagagtttcagaaaatgctgctcagatgtggtgcttctttgtca
tgtgcaactaaagaatgggtcagtaaccactataaatggatcatgtggaagcttgcttca
cttgagagatgctacccaactagagcagctggtaaattcttgacggttgacaatgttctt
gaggagcttaagtaccggtatgacagagaagtgaatcatggtcatcggtcagcaataaag
aaaattttagaagggaatgcttcaccatctttgatgatggtcttgtgcatttcagctatt
tactcttgtcctgaccaaaataacaataagttggaggttaacaaggtagatactaatgaa
gataacaatgacaaccaaagcttgtcagccactaatagaaacatgtctgcaaatattgaa
ttaactgatggatggtattcacttgatgcatcattggatatgacacttttggaacaacta
gagaaaagaaagcttttcgtagggcagaagcttcggatatggggagcttctttatgtggt
tggtctgggcctgtgtcatttcacgaggcgcctggtactgtcaaattagttgtccacata
aatggcacctatcgtgctagatggaatgacgccttaggattctgcaagcatgttggactc
ccactggctttcaggtgcataaaagcttctggtggtagagttcctaggacactggttgga
atcacaaggatatatcctgttctctaccgggaaaggttgcctgatggtcgttctgttgtg
agatctgaaaggatggaaagaaaggcgctggaactataccaccagagagtatctaagatc
acagaagatattctgtttgaacaacaagaaaactgtgacagtactgatgataacgaagaa
ggggctaaaattttaaaaatgctagagcatgctgctgagcctgaatttatacttgcgggc
atgactccggagcagttgaagcttttctcatcttatatagaaaagcaaaagattgttaag
caaaccgaagtatctaagaaggttgagaaggcccttgaagttgctggccttagttcaagg
gatgttacaccatttttgaaagtgagagtgattggccttgtcaataaacattcagcttcc
acatccagtaacaaggaagggctaataacaatttggaatcctactgagatgcagaaacat
aatcttgtggagggacaagcttattctgttacgggattggtaccttcgaaatattgcacc
aaaatcctgtacttgcatgctagaggatcatctacaacgtggaagcccttagcatcagct
cagactacagattttaaaccattctttacccctcataaagcaattgaactcttgaaattt
ggtgaggtgccgatttcaagtgaatttgatattgcaggtcttattttatatgttggcaat
acttatttatgtagcaacaagaaaaagcagtggctctttttaacagatggatctaaattt
atctctggacaagggtgtgaagagcaagattgtcttctagctgttagcatttcgtccgca
accactgacgaagactctgcattatttagttatactctctctggaaacacagttggtttt
agtaatctggtcaaacgacagaaagacgagacgaggcaaatatgggtagctgaggcaaca
gagagctcaagctacactctttccagtgagattcctagaaaatctcacctaaaagaagct
gcagcttcggctgagagatgggcttcaagatcttatcataaaattcaagagctaaaagaa
aggattttatgtatagttggcaacgctggtgtctaa
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