Miscanthus floridulus: 136479302
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Entry
136479302 CDS
T10264
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00040
Pentose and glucuronate interconversions
mflo01100
Metabolic pathways
Module
mflo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
136479302
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
136479302
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
136479302
NCBI-ProteinID:
XP_066333314
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Position
1:37257877..37259643
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AA seq
461 aa
AA seq
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MASSRNPTKLAAFMAPLPLFALLFLSGALEAVVGASNDTSADGAGYTCSSSGSRGSLASP
SSHHSVFSLDRYGARGDGRHDDTRALARAWKAACASPQPAVVLVPNGRRYLLKVVTLGGP
CKSTVTVTVKGTLVASPNRADWSDKDRRLWIVFRSVNKLTLDGGGAIDGNGHKWWPFSCK
INKALPCKEAPTALSFHYCTNLKVVNLKIVNSQQIHMSVEDCANVQLAKLSITAPGTSPN
TDGIHITRSKDVRVTNCKIKTGDDCISIEDGTHKLHVSNVVCGPGHGISIGSLGDDNSRA
KVSDITIDSVQLHGTTNGARIKTYQGGSGYAKDITFQNMIMNNVKNPIIIDQNYCDKARP
CREQRSAVQISNVVFKNIRGTTVTKDAIKMSCSKNMPCQGITLQNIDLKMQGGKGNTEST
CQNAKWRKSGKVVPQPCTSKNMGTFGHLLEILLSSHSLSSW
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagcaggaatccgacgaagcttgcggcgttcatggcgcccctacccctcttc
gcgctcctcttcttgtccggcgctctcgaggctgtagtaggcgcgagcaacgacacctca
gctgacggtgcgggctacacgtgcagctcatctggcagccgcgggtccctggcgtcgccg
tcgtcccaccatagcgtgttcagcctcgaccgctacggcgcccgtggcgatggcaggcac
gacgacacgcgcgcgctcgccagggcgtggaaggcggcgtgcgcctcgccacagccggcc
gtcgtgctcgtccccaacggcaggcgctacctgctcaaggtcgtcaccctcggcggcccg
tgcaagtccaccgtcacggtcaccgtgaagggcacgctggtggcgtcgccgaacagagcg
gactggagcgacaaggacaggaggctctggatcgtgttccggagcgtcaacaagctcact
ctcgacggcggtggcgccatcgacggtaacggacacaagtggtggccgttctcgtgcaag
atcaacaaggctctgccttgcaaggaggctccaacagctttgtcattccactactgcacc
aatctgaaggtggtcaatctgaaaattgtgaatagccaacagatccacatgtcggtcgag
gactgcgccaatgtgcaactggcgaagttgtccatcacagcacctggcacgagccctaac
actgacggcattcacatcactcggagcaaagatgtgcgggtcacaaattgcaagatcaag
actggggatgattgcatatcaattgaggacgggactcataaacttcatgtctccaatgtt
gtttgtggacctgggcacgggatcagcatcggaagcttaggagatgacaactcacgagcc
aaagtctctgatattaccatagattcagtacaattacatggcaccaccaatggagcacgc
atcaagacgtaccagggaggaagtggatatgccaaggacatcacattccaaaacatgatc
atgaacaatgtcaagaacccgatcatcatcgaccagaactactgcgacaaggctaggcca
tgcagggaacagaggtcggcagtgcagattagcaatgttgtcttcaagaatattagaggg
acaaccgttaccaaggatgccatcaagatgagttgcagcaagaatatgccatgccaaggc
attaccctgcagaacattgacctgaaaatgcagggtggcaagggaaacacagaaagtaca
tgccagaatgcaaaatggagaaaatccggaaaggttgttccacagccgtgcacctccaaa
aacatgggcacatttggacacctgttggagatcctgttgtcttcacactcgttgagttcg
tggtaa
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