Miscanthus floridulus: 136481724
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Entry
136481724 CDS
T10264
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136481724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136481724
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136481724
mRNA degradation factors
5'-3' decay
Decapping complex
136481724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
WH1
Motif
Other DBs
NCBI-GeneID:
136481724
NCBI-ProteinID:
XP_066335137
LinkDB
All DBs
Position
1:complement(43632934..43637563)
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AA seq
398 aa
AA seq
DB search
MARSRRGGFGGGGGGVKVTPNLAWDREGTRMLNLSVLRRLDPAVADILITAAHVVAYSFD
EGEREWTRKPVEGSLFVVKRNTQPRFQLVIMNRINTENLVEDLLTDFEVEMQVPYLMYHN
AADEIIGIWFYDPQECQEVAHLFSRIEYAYSRASPKANLSSKSVFEEPEAASGRYALPVV
EDTLEQPTSPTMDDDDVEEFLLTPSKAATCVHTIGGTGAVQPNQSFRAIPYPSHGSHNST
APHSSSLHSLLPSRTSSVTLRAFDAHRPNSSTTIQPASLLNSKPPLLAPMASTHSTVANA
ASSLPTVPPLHPPFADRQPKSAPLLHPFPLPTVSPVPSYGMPLLQPFPPPNPLPLLTPSA
SYSQVVTREQVRAALLRLAQNDNFIDMVYREMAKRPYP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagcaggcggggcggcttcggcggcggcggcggcggcgtgaaggtgacgccg
aacctggcgtgggaccgggagggcacgcggatgctcaacctcagcgtgctgcggcgactc
gaccccgccgtcgccgacatcctcatcaccgccgcgcacgtcgtcgcgtacagcttcgac
gagggcgagcgggagtggacccggaagcctgtggaggggtcgctcttcgtcgtcaagagg
aacacccaacccagattccaattggtcatcatgaaccgtataaacacagaaaatctagtc
gaagatctcttgacagattttgaggttgagatgcaagttccctacttgatgtaccataat
gctgctgatgaaatcattggaatttggttctatgatccacaggaatgtcaagaagttgca
catctttttagtaggatagaatatgcatattcaagggcgtcacccaaggcaaatctttct
tccaaaagtgtatttgaagaaccagaagcagcatctgggcgatatgctctacctgtagtt
gaagatactctagaacagccgacgtcacctaccatggatgatgacgatgttgaagagttc
ctcctaaccccttcgaaggcagccacatgtgtacatacgattggtggaacaggtgcagta
caaccaaaccaatctttcagggctatcccttatcctagtcatggatcacataattctact
gcaccacactcttcttccctgcacagtctgcttccttcacgaacttcatcagttactctg
agggcctttgatgctcatagacccaatagctctaccaccatccaacctgcaagtctttta
aattcaaaacctccactccttgcaccgatggcttctacgcattcaacagtagctaatgct
gcttcatcactgcctactgttcctccacttcatcctccctttgctgaccggcaaccaaaa
agtgctcccttgctccacccctttccactacccactgtgtcccctgttccatcatatggc
atgcccttgcttcaaccattcccacctcctaatccattgccattgcttaccccgtcagca
tcttatagccaggtggtaacaagagagcaagtacgcgctgcactgctgaggcttgcacag
aatgataatttcatcgacatggtttaccgggagatggctaagagaccgtacccatga
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