Miscanthus floridulus: 136481955
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Entry
136481955 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136481955
04120 Ubiquitin mediated proteolysis
136481955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136481955
04131 Membrane trafficking [BR:
mflo04131
]
136481955
04121 Ubiquitin system [BR:
mflo04121
]
136481955
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136481955
Chaperones and folding catalysts [BR:
mflo03110
]
Other chaperones and cochaperones
Others
136481955
Membrane trafficking [BR:
mflo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
136481955
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
U-box type E3
136481955
Multi subunit type E3
STUB1-CHIC2 complex
136481955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_BSK1_C
TPR_12
TPR_14
zf-NOSIP
TPR_16
HEAT_Nup120
TPR_9
FIGL1_N
Motif
Other DBs
NCBI-GeneID:
136481955
NCBI-ProteinID:
XP_066335322
LinkDB
All DBs
Position
1:44474202..44477742
Genome browser
AA seq
278 aa
AA seq
DB search
MAAGGDGVAHQAELRRIEGNVCFKKARLGAAIDCYTEAIALCPNVAVYWMNRALCHFKLK
EWAKVEEDSRKALALDHTLVKGHYLLGCTLLEKEESALAIKEFEKALILLKSANSMDEMA
EEIWQVLAKAKYLDWEKHSTERLWRMQSLKEACESALQEHHFLTGTLEEDSNGSSNEYSE
QIKLLSEVFSQATIADTPADVPDYLCCQITFEIFRDPVITPSGLTYERATLVKHLHKVGN
FDPVTREPLKEHQLVPNLAIKEAVQAYLKEHSWAYKLN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggggacggcgtggctcaccaggcggagctccgccggatcgagggcaac
gtctgcttcaagaaggcccgcctcggcgccgccatcgactgctacaccgaggcaattgcg
ctctgccccaacgtcgccgtctactggatgaatcgggccctatgccatttcaagctcaag
gagtgggccaaggtcgaagaggacagcaggaaggctctcgcgcttgatcacactttagtc
aaggggcactatctgctggggtgtacactgctcgagaaggaagagtctgctcttgctatc
aaggaattcgaaaaggctctgattctcttgaagtccgcgaattcaatggatgaaatggcc
gaggaaatttggcaggtccttgcgaaggcaaaatacttagattgggagaagcattccact
gaacggctatggaggatgcaaagtctgaaggaagcttgtgaaagtgctctgcaggagcat
cattttcttactggtacacttgaggaagactccaatgggtcaagcaatgagtattcagag
caaatcaaactgctatcagaggtcttcagccaagcgacaattgccgatacaccagcggat
gtgcccgattacctttgctgtcagataactttcgagatttttcgagatccagtgatcaca
ccaagtggtctaacatatgagagggctacacttgttaaacatctccacaaggttggcaat
ttcgaccccgtgacgcgagagcctttgaaagagcatcagctggttccgaatctagccatc
aaggaagcagtgcaggcctacctgaaggagcacagctgggcttacaagctgaactga
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