Miscanthus floridulus: 136482236
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Entry
136482236 CDS
T10264
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00061
Fatty acid biosynthesis
mflo00071
Fatty acid degradation
mflo01100
Metabolic pathways
mflo01212
Fatty acid metabolism
mflo04146
Peroxisome
Module
mflo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
136482236
00071 Fatty acid degradation
136482236
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136482236
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mflo01004
]
136482236
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136482236
Enzymes [BR:
mflo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
136482236
Lipid biosynthesis proteins [BR:
mflo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
136482236
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of breast milk
136482236
Exosomal proteins of breast cancer cells
136482236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
136482236
NCBI-ProteinID:
XP_066335560
LinkDB
All DBs
Position
9:complement(80370916..80375579)
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AA seq
665 aa
AA seq
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MSMPETFTVKVGEATPAAGGRPSAGPVYRSIYAKDGLMELPQDIQSPWDFFSGAVKKYPT
NRMLGRRQVITDGKAGEYVWQTYEKVYQKVMRIGSAIRSLDVEPGAHCGIYGSNCPEWVM
AMQACNSQGICYVPLYDTLGANAVEFIMDHAEISIAFVQESKIKSILAVVPKCTAHLRAI
VSFGDFTSEMKMEAEKLGVSCFSWEEFSSMGKQDYKLPKKCKEDICTIMYTSGTTGDPKG
VIITNRAIIAGVMTTEHLLKETDKVITEEDSYFSYLPLAHIFDQVIENYCISKGASIGFW
QGDIRYLMEDVQVMKPTIFCGVPRVYDRIYTGINMKIQSGGIIAKHLFQYAYNYKLANMR
KGLKQHEASPFFDKIVFSKIKEGLGGRIRLMIAGAAPLPGQIEEFMRVTSCSVVVQGYGL
TESCAGCFTSIADVFSMIGTVGPPVTTIEARLESVPEMGYDALSDMPRGEICLRGHTMFS
GYYKRPGLTEEVFSDGWFHTGDIGEWQLNGSMKIIDRKKNIFKLSQGEYVAVEVLERAYM
QSPLVASVWVYGNSFESFLVAVVVPERQALEEWAAANKVAGDFAKLCIDPKARSYIQDQL
NQTGKKLGLRGFEMLKAIYLEPVPFSIEKDVITPTFKLKRPQLLKYYKDRIDQMYKDAKE
GRTAP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgccggagacgttcaccgtgaaggtcggggaggccacgccggcagccggcggc
aggccgtcggccgggcccgtctaccggagcatctacgccaaggacggcctcatggagctc
ccacaggacatccagtccccctgggacttcttcagtggagcagtcaagaagtaccccacg
aacaggatgctcggccggcggcaagttattacagatggcaaggccggtgagtatgtgtgg
caaacgtacgagaaagtgtaccagaaggtcatgaggattggttcagccatcagaagcttg
gacgtagagccgggagctcactgtggcatatatggatccaactgcccggaatgggttatg
gccatgcaggcatgcaacagtcaaggaatatgttatgtgccactatatgacaccctcgga
gcgaatgctgttgaattcatcatggaccatgctgagatatccattgcctttgtccaggag
agcaagatcaaatcaatactagcagtagtccctaagtgcacagcccaccttagagccatt
gttagttttggagattttacaagtgagatgaaaatggaagctgagaaattgggcgtctct
tgcttttcttgggaagaattttcttcaatgggaaaacaagactacaaacttcccaagaaa
tgcaaggaagatatttgtacgatcatgtataccagcggaacaactggagatcccaaaggc
gtgataatcacaaacagggctatcattgctggtgttatgaccacagaacacctcctcaaa
gagacagataaagtgatcacagaagaggattcctatttttcctaccttccgttagcacat
atatttgatcaagtaattgagaactactgtatttctaaaggagcctccatcggattctgg
caaggggacattaggtatctgatggaggatgtacaagtgatgaaaccgacaatattttgt
ggtgttcctcgtgtttatgatcgtatatatacaggtataaacatgaaaattcagtccggc
gggataatagccaaacacctttttcagtatgcctacaactacaaacttgccaatatgagg
aaagggctgaagcagcatgaagcatcaccatttttcgacaagatagttttcagcaaaata
aaggaagggcttggagggcgtatacgcctcatgatagcaggagcagcacctttgccaggg
caaatcgaagagttcatgcgggtaaccagctgcagcgttgtagtgcaaggatatgggctc
actgagagttgtgcaggatgcttcacgtcaatcgccgatgttttctcaatgattggaaca
gttggccctcctgtcacaacaatcgaagcacgactggagtctgtccctgaaatgggctac
gatgcactgtcagacatgccccggggtgagatctgtttgaggggccacaccatgttctct
gggtactacaaacgccctggcctcactgaagaagtgttctcagatgggtggttccataca
ggtgatattggggagtggcaactcaatggctcgatgaagatcattgacagaaagaaaaac
atcttcaagctgtcccagggagagtatgtagcagttgaggtcctagaaagagcatacatg
cagtcaccccttgtggcatcggtctgggtctatgggaacagctttgagtcattccttgtt
gccgtggttgtccctgagaggcaagctctcgaggaatgggcagcagccaacaaggtggca
ggcgattttgcaaagttgtgcattgatcccaaagcaaggagttacattcaggatcagctg
aaccaaactggcaagaaacttgggttgagaggctttgagatgctgaaagcaatttacctt
gagccggtgcctttcagcatcgagaaggacgtcatcactccaacctttaagctcaagaga
ccccagctgctcaaatattacaaggatcgcatcgatcagatgtacaaggatgccaaggag
gggaggactgcaccatga
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