Miscanthus floridulus: 136482313
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Entry
136482313 CDS
T10264
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00600
Sphingolipid metabolism
mflo01100
Metabolic pathways
mflo04382
Cornified envelope formation
Module
mflo_M00094
Ceramide biosynthesis
mflo_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
136482313
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136482313
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mflo01007
]
136482313
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
136482313
Amino acid related enzymes [BR:
mflo01007
]
Aminotransferase (transaminase)
Class II
136482313
BRITE hierarchy
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
136482313
NCBI-ProteinID:
XP_066335625
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All DBs
Position
9:complement(86280983..86286588)
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AA seq
492 aa
AA seq
DB search
MVRRLRHTTALTTLFSYELLFAFGQLRDFFRKLLDCFKPNNDVKGYAPICVGLEDFFVRR
LYQRVQDCFGRPIASAPDSWFDVVERISNDNNKTFQRTSNTTRCLNLTSYNYLGFAAADE
YCIPRVVESLKKYSASTCSARVDGGTTKLHTELEGLVARFVGKPAAVLFGMGYVTNSATI
PCLIGKGGLIISDSLNHNSIVNGARGSDATVRVFQHNSPAHLEKVLRKQVAGGQPRTRRA
WKKIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGRSGRGVCELLGVD
PADVDIMMGTFTKSFGSCGGYIAASKEIIQHLKQSCPAHLYATSMSPPAVQQVISAIKVI
LGEDGSNRGAQKLACIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSREC
FRQKVAVITVAFPVTPLLLARARICISASHTREDLMKALDVISRVGDLVGIKYFPAEPPK
IAEADAEITSCP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaggctgcggcacacgacggcgctgaccacgctcttcagctacgagctgctc
ttcgccttcggccagctcagggatttcttccgcaagctcctcgactgcttcaagcccaac
aacgacgtcaaggggtacgcgccgatctgcgtggggctggaggatttcttcgtgcgacgc
ctctaccagcgggttcaggattgcttcggtaggccaatcgctagcgctccggattcttgg
tttgatgttgttgagcgcatctcaaacgacaataacaagacattccagcgtacctcaaat
accactagatgcctgaacctgacatcctacaactacctcggtttcgctgcagcagatgag
tactgcattccacgcgttgtcgagtctctgaagaagtactcagcaagcacctgcagtgct
cgtgttgatggcggcacaaccaagcttcacactgagctggaggggctggttgcacgtttt
gttggaaagcctgctgctgtcctatttggcatgggctacgttacaaactctgccaccatt
ccctgtctaattggaaagggtgggctgataattagtgactctctgaaccacaattcaatt
gtcaatggcgcaagaggatctgatgcaactgttagggttttccagcataactcccctgct
catctggaaaaggtcctgagaaagcaggtagctggtggtcagccacggacacgcagagca
tggaagaagatcattgtcattgttgagggtatatacagcatggaaggggagctgtgtaaa
ctccccgagatcatagctgtttgcaagaaatacaaggcttacacatatctggatgaggcc
cacagcattggtgctgttgggcggtctggcaggggtgtttgtgaactccttggggttgac
ccagctgatgtagacataatgatgggaactttcaccaagtcttttggatcatgtggtgga
tatattgcagcatcaaaggagataattcagcacctgaaacagagttgcccggcacatctg
tatgctacttccatgtcaccgccagcagtgcaacaagttatctctgctatcaaagttatc
cttggggaggatggctccaacagaggtgcccaaaaacttgcttgcatccgtgaaaacagt
aatttcttcaggtcggagctcaagaagatgggttttgaggttcttggtgacaatgactct
cctgtcatgcccataatgctctacaatccagctaagattcctgcattttctagggaatgt
tttagacaaaaggttgctgttattactgtggcatttcctgtgacaccccttcttcttgca
agagcacgtatctgcatttctgcttcacacactagggaggacctgatgaaagctcttgat
gttatcagcagagtcggtgatcttgtgggcatcaaatatttccctgcagaaccaccaaag
attgccgaagctgatgctgaaattacctcatgtccatga
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