Miscanthus floridulus: 136483408
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Entry
136483408 CDS
T10264
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
mflo Miscanthus floridulus
Pathway
mflo04142
Lysosome
mflo04144
Endocytosis
mflo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136483408
04142 Lysosome
136483408
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
136483408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136483408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136483408
Membrane trafficking [BR:
mflo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
136483408
Exosome [BR:
mflo04147
]
Exosomal proteins
Proteins found in most exosomes
136483408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
136483408
NCBI-ProteinID:
XP_066336568
LinkDB
All DBs
Position
9:11109188..11119335
Genome browser
AA seq
1678 aa
AA seq
DB search
MESEKYICVRETSPQNSVVIIDMAMPMQPLRRPITADSALMNPNTRILALKAQIPGTTQD
HLQIFNIEAKTKIKSHQMPEQVVFWKWITPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTA
NLANNQIINYRCDPAEKWLVLIGIAPGAPERPQLVKGNMQLFSVDQQRSQALEAHAASFA
TFKVVGNENPSTLICFASKTTNAGQITSKLHVIELGAQPGKPGFSKKQADLFFPPDFQDD
FPVAMQVSQKYGLIYVITKLGLLFVYDLETAAAVYRNRISPDPIFLTAESSSTGGFYAIN
RRGQVLHATVNDATVVPFVSGQLNNLELAVNLAKRGNLPGAENLVVQRFQELFAQTKYKE
AAELAAESPQGLLRTPETVAKFQSVPVQVGQTPPLLQYFGTLLTRGKLNAFESLELSRLV
VNQNKKNLVENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFD
KILIYSKQVGYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNM
IREATAFLLDVLKPNLPEHAFLQTKVLEINLVTYPNVADAILANGMFSHYDRPRIAQLCE
KAGLYLRALQHYSELPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRGN
LQIVVQAAKEYSEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAART
GQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLR
YIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLL
TQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAV
VAYRRGQCDDELISVTNKNSLFKLQARYVVERMDGDLWDKVLQPDNEYRRQLIDQVVSTA
LPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPS
RVMDYVNRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAEEF
AFRVEEDAVWSQVAKAQLREGLVSEAIESFIRADDAAHFLDVIRAAEEANVYNDLVKYLL
MVRQKAREPKVDGELIFAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEELYEAAKIIY
AFISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIV
QVDDLEEVSEYYQNRGCFSELIALMESGLGLERAHMGIFTELGVLYARYRSEKLMEHIKL
FSTRLNIPKLIRACDEQQHWKELTDLYIQYDEFDNAATTVMNHSPDAWDHMQFKDVCVKV
ANVELYYKAVHFYLQEHPDLINDMLNVLALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSN
NVSAVNEALNELYVEEEDYERLRESVDMHDNFDQIGLAQKLEKHELLEMRRIAAYIYKKA
GRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVYFIEQGKKECFASCLFICYDLIR
PDVALELAWMNNILDFAFPYLLQFIREYTSKVDDLVKDKIESQKEERAKEKEEKDLVAQQ
NMYAQLLPLALPAPPMPGMGGPPPPMGGMGMPPMGGMGMPPMGPGPMPAFGMPPMGSY
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggagaagtacatctgcgtccgcgagacctccccgcagaacagcgtcgtcatc
atcgacatggccatgcccatgcagccgctccgccgccccatcaccgccgactccgccctc
atgaaccccaacaccaggatcctcgcactcaaagcccaaatacctggaacaacacaggat
caccttcaaatatttaacattgaggctaagactaagataaagtctcaccagatgccagag
caggttgtattttggaaatggatcactcccaaattgttgggtttagtgacacaaacatct
gtttaccactggtcgattgaaggtgattccgagcccaccaagatgtttgataggacagct
aatttggcaaacaatcagatcatcaactatcgatgtgacccagcggagaagtggcttgta
cttattggaattgcacctggagctcctgagaggccacaactggtgaagggaaatatgcaa
cttttctctgttgatcaacagcgtagccaggcgcttgaagcccatgcagcatcttttgca
acatttaaggttgttggtaatgagaacccatcaacccttatctgtttcgcctcaaagaca
actaatgctggacagatcacttcaaagttgcatgttattgaactgggtgcccagccaggg
aaaccgggcttttctaagaaacaagctgacctcttcttcccaccagatttccaggatgat
tttcctgtagctatgcaggtttcacaaaagtatgggcttatctatgtaattacaaagctt
ggccttttgtttgtatatgacttggaaactgctgcagcagtttacagaaatagaatcagt
ccagaccctatattcttgacagcagaatcttcgtctaccggtggattttatgccataaac
agaagagggcaggttttacatgccacagttaatgatgcaactgttgtgccttttgttagt
ggtcagctgaacaaccttgagcttgctgttaatcttgccaagagaggtaatcttcctggt
gcagagaacttggttgtgcaaaggttccaggaactgtttgcgcaaacaaaatacaaggaa
gcagctgagctggctgcagagtctcctcagggcctcttgaggacacctgagaccgttgcg
aaatttcagagtgttcctgtgcaagttggacaaacacctccactcttgcagtactttggc
acattgctaactcgagggaagctcaatgcctttgagtctcttgagctatctcgacttgtt
gtcaatcagaacaaaaagaatcttgtggagaactggttggctgaagacaagctggagtgc
agtgaagaactgggagatctcgtcaagactgtggacaatgatcttgcactgaaaatatac
ataaaggccagggcaacccctaaagttgttgctgcttttgctgaaaggagggagtttgat
aagatacttatatattcaaagcaggttggatatacaccagattatctcttcctcctgcag
accattttgcgtacagatccacagggagctgtcaactttgcactcatgatgtcacaaatg
gagggaggttgtccagtagactataacactatcactgatctcttccttcagagaaatatg
atacgggaggcaacagcttttctgctggatgttctgaagccaaacttgccagagcatgct
tttcttcaaaccaaggttttggagatcaacttagtgacttacccaaatgttgcagatgcc
attcttgcgaatggcatgttcagtcattatgaccgccctcgtattgctcagctgtgtgaa
aaggctggattgtacttgcgtgccctccagcattattcagagttgcctgatatcaagcgt
gtcattgtaaatacccatgccatcgagccccaggcacttgttgagttctttggcaccctt
tcaagggagtgggcactagagtgcatgaaggaccttctactggtcaatctgaggggaaat
cttcagattgttgtgcaggctgcgaaagaatactctgaacaattaggagttgatgcttgc
ataaaattatttgagcaattcaaatcttatgagggcctctactttttcttgggatcctat
ttgagctccagtgaggatccagatatccatttcaaatacatagaagcagctgcaagaact
ggacagatcaaagaagttgaacgtgtaaccagagagtctaatttctatgatgctgagaag
acaaagaactttttgatggaagcaaagctacctgatgcccgtccactgattaatgtttgt
gaccgctttggatttgttccagatctgactcactatctatatacaaacaatatgcttcgg
tatattgagggctatgtacaaaaagtgaatcctggtaatgctcccttggtagttgggcaa
cttctagatgatgaatgcccggaagatttcatcaagggtttgattctctctgttcgttct
ctccttcctgttgagccactagttgatgaatgcgagaagaggaaccgcctacggttgctt
actcaattcttggagcatctagtgagtgagggtagccaagatgtgcatgtccacaatgct
cttgggaaaatcatcatcgacagcaacaataaccctgagcatttccttactaccaaccca
ttttatgattctcgtgttgtgggcaaatactgtgaaaagcgagatcctacacttgctgtt
gttgcttatagacgtgggcaatgtgacgatgagcttattagtgtcactaacaaaaactcg
ttgttcaagctacaagccagatatgtggttgagagaatggatggtgatctgtgggataaa
gttcttcagcctgacaatgaatatagaaggcaactcatagaccaagtggtttcgaccgca
ttgcctgaaagcaagagccctgagcaagtctctgctgctgttaaggcattcatgacagct
gaccttcctcacgaattgattgagcttcttgaaaagattgttcttcagaattctgcattc
agtggaaacttcaacctgcagaacctactcatcttgactgccatcaaggcggatccatcc
agagtcatggactatgttaacagactagacaactttgatgggcctgctgttggagaagtt
gctgtcgaggcacaactgtatgaggaggcttttgctatattcaagaagttcaacttgaat
gtgcaggctgtcaatgttctcttagataacatccgaagcatagaaagggctgaagagttt
gccttccgtgttgaagaagatgctgtctggagccaggttgccaaagcccagttacgtgaa
ggtctggtcagtgaagcaatcgagtccttcattcgcgcagatgatgcagcacacttcctt
gatgtcatccgtgctgctgaggaagcaaatgtgtacaatgatttagtgaagtaccttctg
atggtaaggcaaaaggcacgggaacccaaagtcgatggagaactcatctttgcatatgct
aagattgacagactcagtgacattgaagagttcatacttatgccaaatgttgccaacctt
caaaatgtcggtgaccgtctatatgatgaagaactatatgaagctgcaaagatcatatat
gctttcatctcaaactgggctaagctggctgttaccctggttaagctgaagcagttccaa
ggtgctgtggatgctgctcgcaaggctaacagtgctaaaacatggaaggaggtctgcttt
gcttgtgttgacgccgaggagttccgtcttgcacaaatttgtggtctcaatattattgtt
caggttgatgacttggaagaagtcagtgaatactaccagaacagaggatgcttcagtgag
cttattgctctcatggagagtggtcttggacttgaacgtgcacacatgggcatcttcaca
gaattgggagttctatatgctagataccgctctgagaagcttatggagcacatcaaactt
ttctccacccgtctcaatattccgaagcttattcgagcttgtgatgaacagcagcactgg
aaagaacttacggacctgtacatacagtatgatgaatttgacaatgctgccaccacagtt
atgaaccactctccagatgcatgggatcatatgcagttcaaggatgtttgtgttaaagtt
gcaaatgttgagctatattacaaggcagttcacttctatttgcaagagcatcctgatctc
atcaatgatatgttaaatgtgcttgcacttcggttagatcataccagagttgtagacata
atgcgcaaggctggtcaattgcatcttgtgaaaccatatatggttgcagttcagagtaac
aatgtctctgctgtgaatgaagccttgaatgagctttatgttgaagaggaagactatgag
agactccgtgaatcagttgacatgcatgacaactttgaccagataggtcttgcgcagaag
cttgagaagcatgaattgctggagatgaggaggattgctgcctacatttacaagaaggct
ggcaggtggaagcaatccattgctctatccaagaaagacaacatgtacaaggattgcatg
gagacatgctcacaatctggtgaccgtgaactgtcagaggacttgcttgtctatttcatt
gagcagggcaagaaagaatgctttgcttcctgcctcttcatttgctacgacttgatccgg
ccggatgtcgctcttgagcttgcatggatgaacaacatattggactttgccttcccatac
ctgttgcagttcatccgtgaatacactagcaaggtggatgatttagtgaaggacaaaatt
gagtcgcagaaggaagaaagagccaaagagaaggaggagaaagatcttgtggctcagcag
aacatgtatgcgcaactgcttcctcttgctttgcccgctccgccaatgcctggcatgggt
ggtcctccacctccgatgggtgggatgggcatgcctccaatgggtggaatgggtatgccg
ccgatgggccctggtccgatgccagcattcgggatgccaccgatgggaagctattga
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integrated database retrieval system