Miscanthus floridulus: 136483521
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Entry
136483521 CDS
T10264
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136483521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136483521
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136483521
mRNA degradation factors
5'-3' decay
Decapping complex
136483521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
DUF7120
Motif
Other DBs
NCBI-GeneID:
136483521
NCBI-ProteinID:
XP_066336701
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All DBs
Position
9:20198439..20203219
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AA seq
367 aa
AA seq
DB search
MPPPPQPNGGKVTPNLAMDAGATRVLNLTVLQRLDPAVEDILITAAHVTLYDFNIDLNQW
SRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVEDLLSDFEYELQPPYLLYRNASQEVN
GIWFYNQHDCEAVASLFGRILNAYAKVPPKSKAPSTKSEFEELEPPPASAAIDGPLEPPP
ASAAVVLGTPKESLINYFSGAASIGSVSNTPLSGRVHPSTESIPSSHVPLIIPSAAPTHQ
LPPSGASSAPPLPIHDTNAHTSRSTNLVTPDFFTPPPSSSTPLPPPGASVIPTAPPLHPT
PAPVQRPQYGTPLLQPFPPPTPPPSLNPPHSDRPVITRDRVKDALQRLVQSDEFIDLVYR
ELQKSLV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgcagccgaacgggggcaaggtgaccccgaacctggcgatggacgcg
ggggccacgcgggtgctcaacctcacggtgctccagcgcctggaccccgccgtcgaggac
atcctcatcaccgccgcgcacgtcacgctctacgacttcaacatcgacctcaaccagtgg
agccggaaggacgtcgaggggtcgctgttcgtcgtcaagaggaactcgcagcccaggttc
cagttcatcgtcatgaacaggcgcaacactgataatctggtggaggatctcttaagtgat
tttgaatacgaacttcaacctccatatttgttgtaccggaacgcttcacaagaagtaaat
ggaatttggttttacaatcaacatgactgtgaagctgttgcaagtctatttggaaggata
ctgaatgcttacgccaaagtacctccaaaatcaaaagcgccttccacaaaaagtgagttt
gaggaactagaacctccgccagcatctgctgctatagatggcccccttgaacctccgcca
gcatctgctgctgtagtccttgggacccctaaagaatcattaatcaattacttcagtggc
gctgctagcattggaagtgtatcaaacacaccactgtctggaagagtgcacccgtctact
gagagcattccttcttcccatgtgccattgatcattccatctgctgctccaacacatcaa
ctacccccttcaggtgcttcatcagctccaccattgcccatccatgacactaatgcgcac
actagccggtcaacaaatcttgtaacaccggatttctttactcctccaccatcctcttct
acaccactgcctccgccaggtgcatccgtgattcctactgccccacctcttcatcctact
ccagcacctgttcagcgtcctcaatatggcaccccgctgctccaaccttttccaccgccc
actccacctccttcccttaaccctccacacagtgatagacctgttattacaagggataga
gtcaaggacgcgctacagagacttgttcagagcgacgagttcatcgatttggtgtatcgg
gaattgcagaaatcacttgtatag
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