Miscanthus floridulus: 136483614
Help
Entry
136483614 CDS
T10264
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136483614
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136483614
PBAF complex
136483614
GBAF(ncBAF) complex
136483614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136483614
NCBI-ProteinID:
XP_066336822
LinkDB
All DBs
Position
9:complement(30567959..30573900)
Genome browser
AA seq
782 aa
AA seq
DB search
MPRKASSTSDSRLKWRKRKRNPDTSPSKPSTSAAADHSSDSDSADEDVAAVHGAAGAGDD
DEAPAASEDPAALCLREAEVLPSAEAISGFPAAKRRVVNRPHPSVLALLEAERSASSGDV
PTVALPVLENISHGQLQVLSGVLPDHPSLVTDPDKPSLYVCTPPPLMEGHGVPKQFQGRL
HVVPKHSDWFSPGTVHRLERQVVPHFFTGKSPGHTPEKYVMLRNKVIAKYLENPSKRLAF
AECQGLVGSTAELYDLSRIVRFLDTWGIINYLAAGSVHRGLRMATSLLREEPTGELQLLT
APLKSIDGLILFDRPKCSLPAEDISSMAASSSNSEAVDFDAAFADLDAKIRERLSESSCN
YCLQPLPSLHYRSRKEADIFLCSDCFHDARYITGHSSLDFQRVDGDNDGSENDSDKWTDE
ETLLLLEGIEKYNDNWDDIAGHVGTKSKAQCIYHFIRLPVEDGLLENVEIPNAPIPFRPQ
SNGYQHSDSNGSTSGAPVQNIQQGNQLPFINSSNPVMSLVAFLASSIGPRVAASCAHAAL
SFLTRDDDSRVTSEGMHADGMGNGTNPKFRNHNGASPSVSPENVKHAAMFGLSAAAMKSK
LFADQEEREVQRLAATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRQRISAERVRM
RSALLGPTGSGLPGGSSTMPSNPAGMSPRPVGVPGSMPQTSMPATYANNMQGHGHPQMPQ
MPFLHQRPQMLSFGPRLPLSAIQTQPSQQASNIMFNSGMPNSIAPNHHQLLRSSSGNNSS
AG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtaaggcctcgtcgacctcagattcgcgcctcaaatggcgcaagcggaagcgc
aaccccgacacgtccccgtccaagccctccacctcggcggccgccgaccactcctccgac
tccgactccgctgacgaggacgtcgccgccgtccacggcgcggcgggggccggcgacgac
gacgaggcccccgcggcgtccgaggaccccgccgcgctttgcctccgcgaggccgaggtg
ctgccctcggccgaggccatctctgggttccccgccgccaagcgtcgcgtggtcaaccgg
ccgcatccgtccgtcctcgcgctgctcgaggccgagcgatccgcttcttccggcgatgtc
ccgaccgtggcactgccggtgctagagaacatctcgcacgggcagctgcaggtgctgtcc
ggggtgcttccggaccacccgtcccttgtgacagaccccgacaagccgtccttgtatgtg
tgcacgccgcctcccctcatggaggggcacggggtgcccaagcagttccagggtcgcctc
catgtggttcccaagcactcagattggttctccccggggacagttcataggctggaaagg
caggtagtgccacacttctttacaggcaagtctccagggcacactcctgagaagtatgtc
atgttaaggaataaagtcattgccaaatacttagagaacccaagcaagaggcttgctttt
gctgagtgccaggggcttgttgggagcacagctgaactgtatgatctgagtaggattgtt
aggttcctggacacttggggtatcatcaattaccttgcggctgggtctgtgcaccgtggc
ctgaggatggcaacttcgcttctaagagaggaacctacaggggaactgcagttgcttaca
gcgccattgaaatcaatcgatggtctaattttgtttgaccggccaaaatgcagcctccca
gcggaggacatttcttctatggcagcgtcttcgtcgaactcggaggctgtggattttgat
gctgcatttgcagacttggatgcaaagatcagggagcgtttgtctgagagctcttgcaat
tattgcttacagcctttgccaagtttacattaccggtcacgaaaggaggcagatattttt
ctatgttctgattgcttccatgatgcgagatatattactgggcattctagcttagatttc
cagagagtcgatggggataatgatggatcagaaaatgatagtgataaatggactgatgaa
gaaacattgttgctgttggaaggcattgagaagtacaatgacaactgggatgacattgca
ggtcatgttggaacaaaatcaaaggcacaatgtatttaccattttattcggttgccagtg
gaagatggtttgttagagaatgttgagatacctaatgcacccattccatttcgaccacaa
agcaatggttatcaacattcagattccaatggcagcacttcaggagctccagttcaaaat
attcaacaaggaaatcagcttccattcattaattcttctaatccggtcatgtcactggtt
gcatttttggcctcttcaattggaccaagagttgcagcatcatgcgcacatgcagcatta
tcttttttgactagagatgatgattccagggtgacttcagaaggcatgcatgctgatggt
atgggcaatggtacaaatccaaaatttcggaaccataatggtgcttcaccatccgtttct
ccagaaaatgtgaaacatgctgccatgtttggtctgtcagcagcagcaatgaagtctaag
ctctttgccgatcaagaggaacgtgaagttcaaaggctagctgctactgtaataaatcat
cagttaaagagattggagttgaagctgaagcagtttgcggaagttgagaccttgctcttg
aaggaatgtgagcaagtagaaagggttagacagaggatttcagctgaacgagtcaggatg
aggtcagccctattaggtcccaccggaagcggtctaccagggggcagtagcaccatgcca
tcaaatccagcaggcatgagccccagaccagtcggtgtgccaggctccatgccacagacc
agcatgccagccacatatgccaacaacatgcaggggcatgggcatcctcagatgcctcag
atgccgttcctacatcagcggccacagatgctctctttcggccctcgcctaccactctca
gccatccagactcaaccatcgcaacaggcatcaaacatcatgttcaactctggcatgccc
aattcgattgctcctaaccaccatcagttgctgagatcatcttctggaaacaattctagt
gcaggatag
DBGET
integrated database retrieval system
