Miscanthus floridulus: 136484004
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Entry
136484004 CDS
T10264
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03410
Base excision repair
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136484004
03410 Base excision repair
136484004
03420 Nucleotide excision repair
136484004
03430 Mismatch repair
136484004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136484004
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136484004
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136484004
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136484004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_30
AAA_22
RCF1-5-like_lid
AAA_19
RuvB_N
nSTAND3
AAA_assoc_2
PTCB-BRCT
AAA_5
Gp44_lid
BRCT_2
AAA_17
AAA_24
RsgA_GTPase
AAA_16
Sigma54_activ_2
Zeta_toxin
AAA_18
AAA_14
AAA_2
Mg_chelatase
NTPase_1
AAA_33
TsaE
ABC_tran
NPHP3_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
136484004
NCBI-ProteinID:
XP_066337262
LinkDB
All DBs
Position
9:99738214..99748566
Genome browser
AA seq
984 aa
AA seq
DB search
MSSDIRKWFMKTQDKSAAPSGAASKPAAAAEKKKPVLSIPEKKEAPPALASCDHDPPART
KTSKYFGSKAEKDSDVEMADASAGKSTDKSAAKRKLQKCNNEVKEDSKPLPAKKMSKDEE
DDDDDFVAPTKKKTPVKPPPSKKPKVESNAQVDDAEDEDRMDEDAKTPSKGAGRGRGRGG
RGGAGAAPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTLDSLE
REEATDLIKRYGGRVTGSISKKTSYLLADEDLGGVKSNKAKDLGVPFLTEDGLFDLIRKS
KPAKAPVDKHQSNNSAEKLQKSQTKSSPAKVEKRAEASAVGKSIASNSNAASASADKQKP
KNVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKKQADSAA
KKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKEL
ISNATLNYGDNRSKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQ
KLKSLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHL
QYMSLSQSVVKYDDIRERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDFGMSDPDL
VPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAAC
FASSIVPAAWMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILASQQANL
DREALRLDYLTLILRELTDPLKKMLKDEAVQKVVEFMDTYSLSQEDFDTIVEVSKFKGHP
SPMDGIQPAVKSALTKAYKQGSNSRVVRAADLINIPGMKKPLKKRVAAILEAVEESVPEE
NGLASAEDDEDDSSDTENNDELVPADSTPKLDLQSDKKKGIQVQLDLKSNGNGPSGKKAL
TARSRAAGSGGKAAAGGSAGKRKR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacatccgaaaatggttcatgaagacgcaggacaagagcgcggcgccctcc
ggagccgcttcgaagcccgcggcggcggccgagaagaagaagcccgtgctcagcattccg
gagaagaaggaggcgccgcccgcattggcgtcctgtgatcatgatcctcctgctagaacg
aagacaagcaagtactttgggtcaaaagcagaaaaggactcagatgttgaaatggcagac
gcctctgcgggaaagagtactgacaagagtgcggctaaaagaaaacttcagaaatgcaac
aatgaagtcaaggaggacagcaagcctttgccagcaaagaaaatgtccaaggatgaagaa
gatgacgatgatgactttgtggcacctacaaagaagaaaactccagtgaagccaccgcct
tcaaaaaagcctaaagttgaatctaatgctcaagttgatgatgctgaggatgaggacagg
atggatgaagatgccaagaccccctcaaaaggagctggaagaggaaggggaaggggagga
agaggaggagcaggagctgcccctgggggcagaggtagaggaggaggtgggagaggtttt
atgaattttggtgagaggaaagatcctcctcacaaaggagaaaaggaggtcccagagggt
gcccctgactgtttatctggtctgacatttgtcataagtggtacccttgacagtcttgaa
cgtgaggaagcaactgatctaattaagcgttatggtggccgtgtgactggctctattagt
aaaaagacgagctacttactggccgacgaagaccttggtggagttaaatctaacaaagca
aaagatctgggtgtcccattcttgactgaagatggtttatttgatttgatccgaaaatca
aaacctgcaaaggctcctgtagacaaacatcaaagcaataacagtgctgaaaagcttcag
aaatcacagacaaagagctctccagctaaagttgaaaaacgagccgaagcaagtgctgtg
ggcaaaagtattgcttcaaatagtaatgctgcaagtgcctccgctgacaaacaaaagccc
aagaatgttgaccgtggttctatgcaatggacagaaaaatatcggccaaaagttccaaat
gacatagttggcaatcaatcaatggtcaaacaacttcatgattggttgaaaagttgggat
gcactattccttcattctggccaaaagggtaagggaaagaaacaagctgacagtgcagcc
aaaaaggctgtgttgctgagtggacctcctggtattggtaagactacaactgctaaagtt
gttagtcagatgcttggattgcaggccattgaggtaaatgcgagtgatagccgtggtaag
gcagactccaagattgagaagggtgttggggggagtacatcaaattctatcaaagagctt
atcagcaacgcgactctgaattatggtgacaatcggtcaaaacatcccaaagctgtacta
atcatggatgaagttgacggtatgtctgctggagatagaggtggtgttgctgatcttatt
gctagcatcaagatatccaagatccctattatctgcatttgtaatgaccgttatagccag
aaattgaagagtcttgttaattactgcctgatgctcaacttcagaaaaccaacgaaacaa
cagatgggtaaaagattgatggaaattgccaaaaaggaaggcattcaagctcaagagaat
gcaatggaagagcttgctgaaagagtgcacggagatattcgcatggcactcaaccatttg
cagtatatgagcctctcccaatcagtggtcaaatacgatgatataagggagcgacttaat
agcagttcaaaggatgaagatatttctccttttactgctgttgacaaactttttggtttc
aatggtgggaggttaaggatggatgagagaattgattttggcatgagcgatcctgattta
gttcccttgatcatccaggaaaattatatcaattatcggcctaacaccatcgggaaggat
gaaagtggagttaaaagaatgaatgctctagcccgggctgctgaatctatagcggacggt
gatcttgttaatgtacaaataagaagatatcgacagtggcagttgtcgcaagctgcttgt
tttgcttcatctatagtacctgccgcttggatgcatgggaaccgagaaatccttgaagca
ggtgagcggaattttaataggtttggtggatggttgggtaagtactcgactactaacaaa
aacagaaggctactggaagatgtccacagtcatattcttgcctcccagcaagcaaacttg
gacagggaggcattgaggttggattatcttactcttatcttgagagagctgactgaccca
ctgaaaaaaatgttaaaggatgaagctgttcaaaaggtggtagagtttatggatacatac
tctttaagccaggaagactttgacacgattgtggaagtatccaaatttaagggtcatcca
agtcctatggatgggattcaacctgcagttaaaagtgccttgacaaaagcatacaaacaa
ggaagtaattctcgcgttgttcgagcagcagatctaataaatattccaggcatgaaaaag
cctttaaagaagcgagtggcggcaatcttggaggcagtagaagagagcgtgcctgaagaa
aatggactagcatcagctgaagatgacgaagatgattcttctgatactgaaaataatgat
gaacttgtgcctgccgactctacaccgaagctggacctgcaaagtgacaagaagaaagga
attcaagtccagcttgacctgaagagcaatgggaatggccccagtgggaagaaggcgctt
accgccaggtcaagagcggctgggtcaggtgggaaggccgccgcgggaggctcagctggg
aagaggaagaggtaa
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