Miscanthus floridulus: 136484007
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Entry
136484007 CDS
T10264
Name
(RefSeq) prolycopene isomerase, chloroplastic-like isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00906
Carotenoid biosynthesis
mflo01100
Metabolic pathways
mflo01110
Biosynthesis of secondary metabolites
Module
mflo_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
136484007
Enzymes [BR:
mflo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
136484007
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
GMC_oxred_N
MA3
Motif
Other DBs
NCBI-GeneID:
136484007
NCBI-ProteinID:
XP_066337266
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Position
9:99772686..99778121
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AA seq
592 aa
AA seq
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MPPLATRVHAPVLLAPASPCPAPRLCLASGARGVGGGFRRGALASEKPAAAAVAVAEKAG
GEGGGGGGGEGEGPYDAIVIGSGIGGLVAATQLAAKGARVLVLEKYLIPGGSSGYYRRGG
FTFDVGSSVMFGFSDKGNLNLITQALEAVGRKMEVLPDPSTVHFHLPGDLSVLVHRKYED
FINELISKFPHEKEGILKFYDTCWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECLTLAY
YLPQNAGDIARKFIKDQELLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVG
GVGGIAISLADGLVEKGSEIRYKANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWD
TFGKLLKEKELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPAGTDCHHFVLEDNWNNLEK
SYGSIFLSIPTVLDPSLAPEGHHILHVFTTAGIEDWEGLSRKEYEEKKEAVANEIIRRLE
KKLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTSIDGLYCV
GDSCFPGQGVIAVAFSGIMCAHRVAADIGLEQKSPVLDAGLLGLLRWFRTLA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcttgccacgcgcgtccacgccccggtgctcctcgcccccgcctccccttgc
cccgccccgcgcctctgtttagcgagtggggcccgcggcgtcggcggcgggttcaggagg
ggcgcgctggcctcggagaagccggcggcggcggcggtggcggtcgcggagaaagccggc
ggcgagggcggaggaggaggaggaggagagggcgagggtccgtacgacgcgattgtgatc
gggtccgggatcgggggcctggtggcggcgacgcagctcgcggccaagggcgcgcgggtg
ctggtcctcgagaagtacctcatccccgggggaagctccgggtactaccgccgcggcggg
ttcaccttcgacgttggctcctccgtcatgttcggcttctccgacaagggtaatttgaat
ttgatcacacaagcattggaagcagttgggcgtaagatggaagttctacctgacccttct
acagttcatttccacctacctggtgatctctctgtccttgtgcatagaaagtacgaagac
ttcatcaacgaactgatcagcaaattccctcacgagaaagaagggatccttaaattctac
gatacatgctggaagatcttcaattcactaaattcgttggagctgaagtctctagaggag
cccctttacctttttgggcaatttttccagaagcctctggaatgcttaactctagcttat
tatttgccacagaatgctggggatattgctcgcaagttcataaaagatcaggagctactc
tccttcatagatgctgagtgttttattgtgagcacagtcaatgccttgcaaacacccatg
ataaatgcaagcatggtcttgtgcgataggcacttcggggggattaattatccagttggt
ggcgttggtggtattgcaatatccctggcagatggccttgttgaaaagggcagtgaaata
cgttacaaggcgaatgtaaccaatgttattcttgaaaatggaaaggctgttggggtgagg
ttatcaaatgggaaggagttctttgctaaaacggtgatatcaaatgccactagatgggac
acgtttggaaaactcttgaaagaaaaagaacttccagaagaggagaaaaactttcaaaag
aattatgttaaggcaccatcattcctttcaattcatatgggtgtcaaagcgtcagttctg
cctgctggcactgactgccaccattttgtacttgaggataattggaataatttggaaaag
tcttatggaagcatattcttaagtatccctacagttcttgatccatcattagctcctgaa
ggacatcatatacttcatgtatttactaccgcaggcatagaagactgggagggtctttct
aggaaggagtatgaagagaaaaaagaggcggtggccaatgagattataagaaggcttgaa
aagaagttgtttcctggtcttcaagattcaatagtcctcaaagaggtaggctcaccaaaa
acccaccgaagatttcttgctcgaaatgatggtacatatggaccaatgccacggggtaaa
ccgaagggcttactggctatgcctttcaatactacttcaatagatggcctttactgtgtt
ggtgacagctgttttcctgggcaaggtgtcatagctgtagcattctcagggatcatgtgt
gctcaccgagttgctgcagatattggactagagcaaaaatctccagttctagatgctggt
cttcttgggctactcagatggttcagaacacttgcatag
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