Miscanthus floridulus: 136485013
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Entry
136485013 CDS
T10264
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136485013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136485013
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136485013
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
136485013
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
136485013
BRCA1-C complex
136485013
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Gene cluster
GFIT
Motif
Pfam:
FHA
Nbs1_C
BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
136485013
NCBI-ProteinID:
XP_066338064
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Position
1:61283604..61287608
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AA seq
558 aa
AA seq
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MVWALTPVDTARGTQKRYIFAAGTYKVGRKDCDVIVQTDTSISRIHAEIAIEKMVAWDPH
SGAPASPSFVHVIDRSKYGTFVNKVHGTQGSCLHKDEDMMLTDGDAVTFGTGNATFRLSF
VPIVAYFHGGKSARIDPSLHAVMKSIGAYATRKWSNECTHVLVDESCPLTPELLDAVMAK
KQIVLGDWFKAMAEKNIHTEIPSCTQYIPNLTLDGMVIKMVDINAIQNCLAGYTFILGSS
DKYQFGEKLPGLLESTGAKYLHIDDFCANSQDSAAGDTDQQILVVPARYPLEFSKIRGLF
TLSKISDVKLFAATLSGCLEATSIEPPAFIVTSSNSTDDTIVADSDVEMETATSNPTGAA
NKSQHHIENISDDEKEITNITNEVAVSISATKGNVIHPKYPEKVEDLKPIEEDVKVIEKT
AMYRSTARDEDARIFNKAPRDENLDTSRDGASDVIFSQNLVVRSFPQSAPATPTEVGGVN
FKRFRKRETVSGNSFKDLVPFAREPYRESDYERGTLTDFMREEKQRKQMEAIADDLFNNA
KSKKRAAAGSSIHTLLTG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggcgctgacccccgtcgacacagcgcgcgggacgcagaagcgttacatcttc
gccgccgggacgtacaaggtcggccgcaaagattgtgatgtcattgttcaaactgacaca
tctatatcccgaatccatgcggagattgcaattgaaaagatggttgcctgggatccgcat
tctggtgcacctgccagtccatcatttgttcatgtaatcgaccgatcaaagtatggcaca
tttgtcaacaaagtacatggaacccagggcagttgcctgcataaagatgaagatatgatg
cttactgatggggatgctgtgacttttggaactggtaatgcgaccttcaggttgtcattt
gttccaatagtggcctattttcatggcggaaagtcggcacgaattgatccatcattacat
gcagtcatgaaatcgattggtgcatatgctactcgtaagtggagcaatgaatgtacgcat
gttcttgttgatgaatcatgtccgttgacacctgagctcctcgatgcagttatggcaaag
aagcagatcgtgttgggagactggtttaaggcaatggctgaaaagaacatacacacagag
atcccttcttgcacacaatacattccaaacttgactcttgatgggatggtgatcaagatg
gtggatatcaacgccattcagaattgcctagcaggctatacttttatcctggggtcatca
gataaatatcaatttggtgagaagctccctggattactggaatcaactggagcaaaatac
ctccacattgatgacttttgtgcaaacagccaggactcagcagctggagatactgatcaa
caaattcttgtagttcctgcaagatatcctttggaattcagcaagatacgtgggttattt
actttgtcaaagatcagtgatgttaagctatttgctgctacattatctggctgcttggaa
gcaacttctattgaaccacctgctttcatcgttacatcctcgaattccacggatgacact
attgtggcggattcggatgttgaaatggagacagcaacttctaatcctactggtgctgct
aacaagtctcaacatcacattgagaatatctctgatgacgaaaaggaaatcacaaatata
accaatgaagttgctgtaagtatcagtgcaacaaagggtaatgttattcacccaaaatac
ccagagaaagttgaagatttgaaacctattgaggaggatgtgaaggtcatagagaaaaca
gcaatgtataggtccacagccagagatgaggatgctcgcattttcaacaaggcacccagg
gatgagaatttggacaccagcagggatggggcttctgatgtcatatttagtcagaatctg
gttgtcagaagcttccctcagtcagctcctgctacaccaacagaagttggaggtgttaac
ttcaaacgtttcaggaagagggaaacagtgtctggaaacagcttcaaggaccttgttcca
tttgcgcgggaaccatacagagaatctgactacgaacgtggcacattgaccgatttcatg
cgggaggagaagcagcggaaacaaatggaagccattgcagatgacctcttcaacaatgca
aagtcgaagaaaagagcagctgctggaagttcgattcacaccctacttaccggctaa
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