Miscanthus floridulus: 136485102
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Entry
136485102 CDS
T10264
Name
(RefSeq) long chain base biosynthesis protein 2a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00600
Sphingolipid metabolism
mflo01100
Metabolic pathways
mflo04382
Cornified envelope formation
Module
mflo_M00094
Ceramide biosynthesis
mflo_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
136485102
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136485102
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mflo01007
]
136485102
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
136485102
Amino acid related enzymes [BR:
mflo01007
]
Aminotransferase (transaminase)
Class II
136485102
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
FmdE
COA2
Motif
Other DBs
NCBI-GeneID:
136485102
NCBI-ProteinID:
XP_066338144
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All DBs
Position
10:complement(92238849..92242805)
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AA seq
488 aa
AA seq
DB search
MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKFVDWFKAKNVKGYAPICLGLEDFYVRRLY
LRIQDCFGRPIASAPDSWFDVVERTSNDNNKTLQCTSNTTRCLNLGSYNYLGFAAADEYC
TPRVIESLKKYSASTCSVRVDGGTTKLHAELEELAARFVGKPAAILFGMGYVTNSAIIPC
LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWK
KIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPA
DVDIMMGTFTKSFGSCGGYIAASKEIIQHLKQSCPAHLYATSMSPPAVQQVISAIKVILG
EDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
QKVAVVTVAFPATPLLLARARICISASHTREDLMKALDVISRVGDLVGIKYFPAEPPKIA
EADHDKLE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctgccgtacacgacggcgctgaccacgctgttcagctacgggctgctcttc
gccttcggtcagctcagggatttcttccgcaagttcgtcgactggttcaaggccaagaac
gtcaaggggtacgcaccgatctgcctgggcctggaggatttctatgtgcggcgcctgtac
ctgcggatccaggattgctttggtaggccgatcgcaagtgcaccagattcatggtttgat
gttgttgagcgcacctcaaatgacaataacaagacattacagtgtacctcaaataccacc
aggtgcctcaacctgggctcctacaactaccttggctttgctgcagcagatgagtactgc
acaccacgcgttattgagtctctcaagaaatactcagcaagcacctgcagtgtccgtgtc
gatggcggtacgaccaagcttcacgctgagctggaggagttggctgcgcgttttgttgga
aagcctgctgctatcctatttggcatgggttatgttacaaactctgccatcattccctgc
ctaattggaaagggtgggctgataattagtgactctctgaatcataactcaattgtcaat
ggcgcgagaggatccggtgcaactgttagggttttccagcataactcccctgctcatttg
gaagaggtcctgagagagcagatagctggtggtcaaccacggacacacagaccatggaag
aagatcattgtcattgttgagggtatctatagcatggaaggggagctgtgtaaactccct
gagattatagctgtctgcaagaaatacaaggcttacacatatctggatgaggcccatagc
attggtgctgttgggcagtctggccgcggtgtttgtgaactccttggggttgacccagct
gatgtagatataatgatgggtactttcaccaagtcttttggatcatgtggtggatatatt
gccgcatcaaaggagataattcagcacctgaagcagagttgtccggcccatctgtatgct
acttccatgtcaccaccagcagtccaacaagttatctctgccattaaagttatccttggg
gaggatggctccaacagaggtgcccaaaaacttgcacgcatccgtgagaacagtaatttc
ttcaggtcagaactcaagaagatgggttttgaggttcttggtgacaatgactctcctgtc
atgcccataatgctctacaatccggctaagattcctgcattctctagggagtgccttaga
caaaaggttgctgttgttaccgtggcatttcctgcgacacctcttcttcttgctagggca
cgaatctgcatttctgcttcacacactagggaggacctgatgaaagcccttgatgttatc
agcagagttggtgaccttgtaggcatcaagtacttccctgcagaaccaccaaagatcgct
gaagctgatcatgataagctggagtag
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