Miscanthus floridulus: 136485139
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Entry
136485139 CDS
T10264
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic-like isoform X1
Organism
mflo Miscanthus floridulus
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
RecG_dom3_C
UPA
Motif
Other DBs
NCBI-GeneID:
136485139
NCBI-ProteinID:
XP_066338175
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Position
10:94975978..94991416
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AA seq
824 aa
AA seq
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MAAPPPHTPPAAAPQPLLLLHHHPPALVLRVRLRPRSLRLARVPAPAATATAAAAASVAP
DDISQLNYRLRAIARRREASSSAASSSSSSPVDPAQAEAYLRMIRDQQRLGLRQLRREVA
ESDDGDEERERKGVAAGSSLGHRVDPRELEPGEYVVHKKVGVGKFACISAEDGVDYVFIQ
YADGMAKLAVDQAARMLYRYNLPHEKTRPRNLSKLNDPSTWEKRRLKGKLAVQKMVVNLM
ELYLQRLRLGRPPYPKPASMDDFATEFPYEPTPDQCQAFIDVEKDLTERETPMDRLICGD
VGFGKTEVAMRAIFIVVSAGFQAMVLAPTIILAKQHYDVMTERFANYPEIKVAIFSGAQS
KEEKDELITKIKNGDLHIIVGTHALLTERMVYSNLGLLVVDEEQKFGVQQKEKIASYKSS
IDVLTLSATPIPRTLYVALTGFRDASLMSTPPPERVAVKTYVSAFSKERALSAIKFELQR
GGQVFYVVPRIKAIDDVLQFLKDSLPDVPIAVAHGKKMSKNIQLAMEDFASGEVKILVCT
HIIESGIDIANANTMIVQFAELYGLAQLYQLRGRVGRSGREGFAYLFYTDKSLLSRVATD
RLGAIEEHSELGQGFHVAEKDMGIRGFGSLFGDQQSGDVANVGIDLFFDMLFDSLSKVDQ
FCLVPVSYKDVQLDINISPRLPSEYISYLENPVELLNEAAKAAEKDLWTLIQFTEDLRRR
YGKEPRDMELLLKKLYVRRMAADLGISRIYPSGKMIFMKTNMNKKVFRLMTEAMTSETHR
NSLSFARKEIKAELLVSLPDTLLLNWLFHYLSDCYTVIPALVKY
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccaccgcctcacaccccgccggcggcggctccccagcccctcctcctcctc
caccaccacccgccagcactggtcctccgcgtccgcctccgaccccgcagcctccgcctc
gcgagggtgcccgcgcccgcggccacggccacggcggcagccgcggcctccgtcgccccc
gacgacatctcgcagctcaactaccgcctccgcgccatcgcccgccgccgagaagcctcc
tcctccgccgcctcgtcctcgtcctcctcccccgtcgacccggcccaggccgaggcgtac
ctccgcatgatccgcgaccagcagcggctcggcctgcgccagctccgccgggaggtagcc
gagagcgacgacggcgacgaggagcgggagaggaagggggtggcggcggggagctcgctg
gggcatcgggtggacccgcgggagctggagcccggcgagtacgtcgtgcacaagaaggtc
ggcgtcgggaagttcgcctgcatcagcgccgaggacggcgtcgactacgtcttcattcag
tacgctgacggcatggccaagctcgccgtcgaccaggccgcgcgcatgctctacagatac
aacctgcctcacgagaagacaaggccacggaatttgagcaaactgaacgatccttccacc
tgggagaagcggaggctgaaagggaagcttgctgttcagaagatggttgtcaacctgatg
gaattgtatttgcaaaggttgaggttgggaagacctccgtacccaaagccggcatccatg
gatgactttgccactgaatttccttatgagcctactccggaccaatgccaggcctttata
gatgttgagaaagatctgacagaaagggaaacaccaatggatagattaatctgtggagat
gtgggctttggcaaaacagaagtcgcaatgcgcgctatattcattgttgtgtctgcagga
tttcaagctatggttcttgctccaacaataatacttgccaagcaacattatgatgtaatg
actgagcgttttgcgaactatccagagataaaggtcgccatatttagtggtgctcagagc
aaagaggagaaagatgagctaataacaaagattaagaatggggatttgcacatcattgtt
ggcactcatgctcttcttacggaaaggatggtctatagcaatcttggtctcctagtggtg
gatgaagaacaaaagtttggtgttcaacaaaaggagaagattgcctcatacaagtcttct
attgatgttcttacactttctgcaacacccattccacgtactctgtatgtggctttgact
ggtttccgtgatgcaagtttgatgtctacaccacctcctgaaagagttgctgtaaagaca
tatgtgtcagcatttagtaaagaaagggccctatcagctatcaagtttgagctgcaacgt
ggtggtcaagtcttttatgttgtgcctcgaataaaagcaatagacgatgtgttgcagttt
ctcaaggactctctgcctgatgtaccaattgctgttgctcatggaaagaaaatgtcaaag
aacatacaacttgctatggaggattttgctagcggggaagtcaaaattcttgtctgcaca
catatcattgaaagtggaatagatattgcaaatgccaatacaatgattgtccagtttgct
gaactatatggacttgcccagctgtatcagttacgaggaagagtaggaagatcaggtaga
gaaggcttcgcataccttttctacactgataagtctttgctctcgagagttgcaacggat
agacttggagctattgaggagcattcagagcttggacaaggtttccatgttgcagagaag
gatatgggtatcaggggatttggaagcttgtttggtgatcaacagtctggagatgttgca
aatgttggcattgatctattctttgatatgctttttgatagcttgtcaaaggttgatcag
ttttgccttgttcccgtttcgtacaaagatgttcagctggatataaacatttctccacgt
ctcccctctgaatacataagttatctggaaaatcctgttgagttgctcaatgaagcggca
aaagctgcagagaaagacctatggaccttgatacagtttacagaagacctccgtcgacga
tacggaaaggagccccgtgatatggagttactactgaaaaagctctatgtaagacggatg
gctgcagatcttggtatcagtcggatatatccatctggcaagatgatattcatgaaaaca
aacatgaacaagaaggtatttaggctcatgacagaagcaatgacttctgaaacacatcgg
aattccctatcatttgctagaaaggaaattaaggctgaactcctcgtgagcttgccagat
accctacttctgaactggcttttccattacttatcagactgctatactgtaataccagcc
cttgtgaagtactag
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