Miscanthus floridulus: 136486038
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Entry
136486038 CDS
T10264
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 12-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136486038
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136486038
mRNA degradation factors
5'-3' decay
Decapping complex
136486038
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
136486038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136486038
NCBI-ProteinID:
XP_066338908
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All DBs
Position
1:complement(66489510..66494136)
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AA seq
505 aa
AA seq
DB search
MHQPRARYPPGYGSSGGGGAGRGGGGGNGGGGGSGGGGSHNYYGRNPQPQQQHHYQQQQQ
HAHRNSSHQQQWLRRDQVPAVAGAASGNAAAKTAPQLDAVDSSSQDWKAQLNIPAPDTRY
RTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
KTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLK
DDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSVGALIHF
LPPSRQLLMFSATFPVSVKEFKEKYLPRPYVINLMDELTLKGITQYYAFVEERQKVHCLN
TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRAFHDFRNGACR
NLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRYGHLGLAVNLITYEDRFNL
YRIEQELGTEIKTIPPQIDLAVYCQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagcccagagcccgctacccacccggctatggctccagcgggggaggcggtgcc
ggacgtggcggtggaggcggcaatggaggaggaggaggcagcggcggcggtggaagccac
aactactacggccggaacccgcagccacagcagcaacaccactaccagcagcagcagcag
cacgcgcataggaactcctcgcaccagcagcagtggctgcggcgagaccaggtccccgcc
gttgcgggggcagcgtccggaaacgctgcggctaaaacggcgcctcagcttgacgccgta
gactcgagttctcaagattggaaggctcaactaaatataccagctccagatacacgctac
aggacagaggatgtcactgcaacaaaaggcaatgagtttgaagattatttcttgaaacgt
gaactgcttatgggaatctatgaaaagggatttgaaaggccatctcctattcaagaagaa
agcattcctattgcgctgactggaagtgatattcttgcaagggcaaaaaatggcactggg
aagactgctgcattttgcattccggcacttgaaaaaattgatcctgaaaaaaatgctatt
caagttgttatactagtaccaacaagggaactggctctgcaaacttcacaagtctgtaaa
gagctcgggaaatacctgaacattcaagttatggttagcactggaggaaccagcttgaag
gatgacatcatgcgtttataccaacctgttcatttactcgttggtactcctggcaggata
cttgatcttaccaggaagggcatttgcgtgctgaaagattgttcaatgcttgtcatggat
gaggcagacaagctattagctccagagtttcagccttctgtgggggcacttattcatttc
cttccacctagtcggcaactgttgatgttttcagcaacctttcctgtatctgtcaaggaa
ttcaaagagaaatatctgcctagaccttatgtgattaatctaatggatgaactgaccctg
aaaggaataacacaatattatgcttttgttgaagaaaggcagaaagttcattgcctgaat
acacttttctcaaagcttcaaattaatcaatccattatattctgcaactctgttaataga
gttgagctactggctaagaaaataactgaactcggttattcatgcttctatatccatgct
aagatgttgcaagaccacaggaaccgagcgtttcatgattttcgtaatggtgcttgcaga
aaccttgtgtgcacagatctgtttaccagaggaattgatatccaggctgttaatgttgtc
attaattttgacttccctaagacatctgagacatatttacacagggttggccgttctggg
agatatggacaccttggtttggcagtgaacttgatcacttatgaggaccgtttcaacttg
tataggattgagcaagaacttggaacagaaatcaagacaatacccccacagattgacctg
gccgtatactgccaatga
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