Miscanthus floridulus: 136486104
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Entry
136486104 CDS
T10264
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00061
Fatty acid biosynthesis
mflo00071
Fatty acid degradation
mflo01100
Metabolic pathways
mflo01212
Fatty acid metabolism
mflo04146
Peroxisome
Module
mflo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
136486104
00071 Fatty acid degradation
136486104
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136486104
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mflo01004
]
136486104
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136486104
Enzymes [BR:
mflo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
136486104
Lipid biosynthesis proteins [BR:
mflo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
136486104
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of breast milk
136486104
Exosomal proteins of breast cancer cells
136486104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4229
LRR_4
Motif
Other DBs
NCBI-GeneID:
136486104
NCBI-ProteinID:
XP_066338985
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All DBs
Position
10:4015588..4024065
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AA seq
726 aa
AA seq
DB search
MGEVSDDNSNMSFLKRIATSDVPLLKEYGVNGVVIALLLAVVTPVLLSMMFGKKTKQRAV
RADVGGEEGFAMRNSRFSSLVEVPWEGATTMAALFEMASKKYSRRRCLGMRKLIKREFVE
SSDGRKFEKLHLGEYEWDTYAEAFNRACNFASGLIKMGHNLDSRAAIFSDTRAEWIIAAQ
GCFRQNLTVVTIYASLGEDALVHSLNETQVSTLICDSNQLKKIPAISSKLQSLKHIIYIE
DEPVEAETLNQVKHLTTLSFTEVEELGKTSHVDARLPSSSDTAVIMYTSGSTGLPKGVMI
THGNIVATTAAVMTIVPNLGMNDVYLAYLPLAHVFELAAETVMLASGTAIGYGSALTMTD
TSNKIKKGTKGDVSVLNPTLMISVPAILDRIRDAVFKKVGEKGGLTKKLFDFAYKRNLAA
IEGSWFGSWAPERMIWDNIIYKPIRAMLGGRVRFVLCGGAPLSSDTQRFMNICLGVPVGQ
GYGLTETCAGAAFTEWDDTSVGRVGPPLPCCYVKLVSWEEGGYRISDSPMPRGEVVVVGH
SITKGYFNNEAKTNEVYKVDERGIRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVS
LGKVESALATSNYVENIMVYADPFHNYCVALVVPAHQALEKWAQNSGINYKGFEELCQND
QAIKEVQQSLSKAAKVGRLEKFEVPAKIVLLPEPWTPESGLVTAALKLKREQIKTKFKDD
LDKLYH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagttagtgatgataattccaacatgtcctttctaaaaagaatcgctacaagt
gacgtaccactgctgaaagagtatggtgtcaatggagttgtcatcgccctgcttctggct
gtagttactcctgtcttgctttccatgatgtttggtaagaagacaaagcaaagggcggtg
cgagctgatgtgggtggagaggagggatttgccatgcggaacagtaggttttcatcctta
gttgaagtcccttgggagggcgccaccacaatggcagctctgtttgagatggccagcaaa
aagtactctcgacggaggtgtcttggcatgaggaagctaattaagagggaatttgtggaa
tcttctgatggtaggaagtttgagaaactgcaccttggtgaatatgaatgggatacctat
gctgaggcatttaaccgcgcatgtaattttgcttctgggcttatcaagatgggccacaac
ctagatagtcgtgctgctatattctctgatacaagagctgagtggatcattgctgctcag
ggatgcttccgacaaaacttaactgttgtaacaatatatgcatctcttggtgaggatgca
ttggtgcattcattaaacgagacacaggtttcaactctgatatgtgattcgaatcaactt
aagaagatacctgcaatcagctctaaattgcagagtcttaagcatattatctatattgag
gatgaacctgttgaggctgagacactgaatcaagtgaagcatctgacaacattgtctttc
actgaagtagaggaactaggcaagacatctcatgttgatgcaaggttaccttcaagctct
gatactgcagttatcatgtatacaagcggaagtactggccttcccaagggtgtaatgatc
acacatggcaacattgtggccacaactgcagcagtcatgacaatagtcccaaaccttggc
atgaatgatgtttatctggcttaccttccattggctcatgtctttgaactagcagcagag
actgtcatgttagcttctggtactgctattggatatggttcagcattgactatgactgat
acatcaaacaagattaagaaggggacaaaaggagatgtttctgtactgaatcctactctt
atgatttcagttcctgcaattttggatcgtatcagagatgctgtgtttaagaaagttggt
gagaagggtggcctgacaaaaaagctgtttgattttgcatataagcgaaatcttgcagca
attgaggggagttggtttggatcttgggcaccggagaggatgatatgggataacattatt
tataaaccaatacgggcaatgcttggaggacgtgtaagatttgttctttgtggtggtgca
cctctatcaagtgacacacaaagatttatgaatatatgtctaggtgtcccagtgggtcaa
ggctatggattgactgaaacttgtgctggagcagctttcactgaatgggatgacacaagt
gtgggtcgtgttggtccaccgcttccttgctgctatgtcaagcttgtttcgtgggaagaa
ggtggttataggatttctgattctccgatgccgagaggagaggtcgtggttgttggacac
agcataacaaaaggttatttcaacaatgaagcaaagacgaatgaagtatacaaggttgat
gagaggggcatacgctggttctacactggtgatattggtcagttccatcctgatgggtgc
cttgagattattgacaggaaaaaagatatagtaaagcttcagcacggagaatatgtgtct
cttggcaaggttgaatcggctctggcaacaagcaattatgtggagaacatcatggtctat
gctgatccatttcataattattgtgttgccctggttgttccagcacaccaggccttggag
aagtgggctcaaaattctgggataaactataaaggctttgaagagctttgccaaaatgat
caagcaattaaggaggttcagcaatcactatcaaaggccgcgaaagtaggaaggctcgag
aaattcgaggttccagcaaagatcgtgctgttgcctgaaccgtggacgccggagtccggg
ctggtgacggcggcgcttaaactgaagagggagcagataaagaccaaattcaaagacgat
ttggacaagctctatcactga
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