Miscanthus floridulus: 136487091
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Entry
136487091 CDS
T10264
Name
(RefSeq) sister-chromatid cohesion protein 3-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136487091
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
136487091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
Cnd1
HEAT_2
DUF364
Motif
Other DBs
NCBI-GeneID:
136487091
NCBI-ProteinID:
XP_066340321
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Position
10:122406810..122416047
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AA seq
1121 aa
AA seq
DB search
MEETLASLRRPKRRGRPPRPREEYHHADFEDVAEADGLAPPQSKRKRAASAAAAASLEDQ
PLIDIIKHNGRLISHAVKRLVEDYESKKNSVTFQILTMLFEACGAKHEIYPDYLRESDVD
DIVVSLVDLARKGLVEDNYNSKHKDLKNFKENLVSFWDSLVLECQNGPLFDDLLFQKIKD
YVVALSCAPPRVYRQVASLIGLQLVTAFISVAKTLSGQRETTQRQLNAEKKKQSDGPLIE
SLNNRLALTHANITYLEELMRKIFGGLFMHRYRDVDPEIRMSCIRSLGIWVVSYPSLFLQ
DIYLKYLGWTLNDKNAGVRRTSILALQSLYEVDDNIPSLGLFTERFYTRMIQLADDIDVS
VAVSAIGLIKQLLRHQLLSDDDLGPLYDLLIDEPPMIRRAIGELVYDHLIAQNIKTSHPG
ARDGENEPSEVHIGRMLQILREFSDDSVLSSYVIDDIWDDMKAMKDWRCIVSVLLDENPA
IELTDMDGTNLVRMLHASARKAVGERIVPAVDNRKLYYNKGQKEILENSRREITSALLTR
YPQLLRKFISDKAKISPLVDMMTLLKLELYSYKRQEKHFKTAIDLIADAFFKHGEKGPLR
SCIKAIIFCCTECQADLKDYAENKLKNLEDELVLKVRTAIKEVEAGDDEYSLLVNLKRLY
ELQLSKPVKNDSLFEDMYRILAHLRDMDNEVKSFLLLNMHLQVAWCLHAIDGENPSETCI
DELLSKQSSLFDQLYYYLVVLPTYQKEGRSTTVLSCRVCIITAEMWCLFKKSKYSSTRLE
SLGYLPQPDMVQKFWKLCEQQLNISDETEDEDANEEYIEDTNRDAVMIAAAKLVLADTVS
KDYLGPEIVSHYVSHGASTTEIIKHLITSLKKNTNFDMGALFFEALIRAYERYMAHVHDG
ENQILTGKSYSECQDLASRLAGSYVGAARIKNKSDILKIIQYGVSFAFVDLPNQLSFLEA
ALLPFVSKLQSSDIPDILADVEKRTQDTNMVGDQGAWRPFFTFVEHLRDKHAKNEVLHEE
EEKPVRRRGRPRKVRDVPDVPDHQRRGKKLFRDDGHNSSGEESISASDHQGHGEDDDSDG
DADQPLINTIRSSAAKLRSLKVSQQGTSSHKGVPGPSGSNS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacgctcgcctcgctccgccgcccgaagcgccgcggccgcccgccgcggccg
cgggaggagtaccaccacgcggacttcgaggatgtggccgaggcggacgggctcgcgccg
ccccagtccaagcggaagcgcgccgcctccgccgccgccgccgcgtccctggaggaccag
ccactcatcgatattatcaaacataatggcaggctgatcagccatgctgtcaaaaggttg
gttgaggattacgagtcaaagaaaaattcggtgacgtttcagattttaacaatgctattt
gaggcttgtggtgccaagcatgagatttatcctgactaccttcgcgagtctgatgtggat
gacattgtggtgtctcttgttgacctagctaggaaaggtctggtggaagataattacaac
tcaaagcataaggatctcaaaaacttcaaagagaacctggtttctttttgggatagctta
gttcttgaatgtcaaaatggcccattgtttgatgacctcttgttccaaaaaatcaaagac
tatgtggttgctctgtcatgtgctcctccaagggtatatcgccaagtagcttcattgatt
gggctccagcttgtaacggcattcatatctgttgctaagactctgagcggacaacgcgag
accactcaaaggcagctgaatgcggagaagaaaaagcaaagtgatggaccacttattgaa
tctctcaacaatagattagcccttactcatgcaaacattacatacttggaggaattgatg
cggaagatattcggcgggttattcatgcaccgttatcgtgatgttgatcctgagatccgg
atgtcctgtatcagatctcttggtatttgggttgtctcttatccatcactctttttgcaa
gatatatatttgaagtatcttgggtggacactaaatgacaagaatgctggagttaggagg
acttccattcttgccttgcaaagtctttatgaagtggatgataacataccttctcttggt
ctctttactgagaggttttacaccaggatgatccagcttgctgatgatattgatgtttca
gtagctgtgtcagctatagggttgatcaagcaattgctgaggcatcaactgttgagtgat
gatgatttgggcccactatatgatcttcttattgatgagcctccaatgattaggcgtgcg
attggtgagttagtttatgatcacctaatagcacaaaacatcaagacctctcatcccgga
gctagagatggggaaaatgaaccttctgaggtccatattggtcgaatgctgcaaatcctt
agggaattttcagatgactcagtcctcagttcatacgtcattgatgatatttgggatgac
atgaaggcgatgaaagattggaggtgtatagtttctgtgcttctcgatgaaaatcctgca
attgagcttactgacatggatggaacaaatctagttcgcatgctgcatgcctctgcaagg
aaggctgttggggaaagaatagttcctgcagtggacaacagaaagctgtactacaataaa
ggccaaaaggaaatattggaaaatagcaggcgtgaaataacaagtgccttattgacaagg
tatccacagcttttaagaaaattcatatctgacaaagctaagatatcacccctagttgat
atgatgactcttttgaaacttgagttgtattcatacaaaaggcaagagaagcatttcaag
acagccatagatctcatcgcagatgctttctttaaacatggtgagaagggcccactgaga
tcttgcatcaaggcaattattttctgttgcaccgagtgccaggctgatcttaaagattat
gctgaaaataaacttaagaatcttgaagatgagttggtcttgaaagtcagaactgcaatc
aaggaagtagaggcaggtgatgatgaatactccctcttggttaatttgaagcggctttat
gaacttcagctgtcaaaacctgtcaagaatgatagtttatttgaggatatgtaccgaatc
ctcgctcatcttagggatatggataatgaggtgaagagctttctcctcctcaatatgcac
cttcaagtagcttggtgccttcatgcaattgatggtgaaaacccatctgaaacatgtatt
gatgaacttttatcaaagcaaagctcactttttgatcaactctattattatttagtggta
ctgcccacttatcagaaagaggggaggagcaccactgtactttcatgcagagtctgcatc
attactgcagagatgtggtgcttgtttaagaagtcaaaatattcttcgacaagactagag
agtttgggttatctcccacagccagatatggttcagaagttctggaaactatgtgaacaa
cagctcaatatatcagatgaaacagaagatgaagatgcaaatgaagaatatattgaagac
acaaacagggatgctgtcatgattgcagctgcaaagctagtgctcgctgatacagtatca
aaggattatcttggtccagagattgtttctcactatgtatctcatggagcaagtacaaca
gagataatcaaacatctaattacttctctaaagaaaaacacaaactttgacatgggagct
ctattttttgaggcgctgataagggcatatgaacgttacatggcccatgttcacgacgga
gaaaaccaaatcctgactggcaagtcttattcggaatgtcaagatcttgctagtcgtctt
gcagggtcctatgttggggccgctcgcattaaaaacaagtcagatatcctgaagattatc
caatatggagtttcttttgcttttgtcgatcttccaaatcaattgtcgttccttgaggct
gctcttctgccatttgtttctaaacttcagtcgtcagatattccagatattctggcagat
gtagagaagaggactcaagataccaatatggttggagatcaaggtgcttggcgcccattt
tttacattcgtagagcacctacgtgataaacatgcgaagaatgaggttttgcatgaggaa
gaggaaaaacctgtgaggcggcggggccgtccgagaaaggttagagatgtgccagatgta
ccagatcaccagcgacgtgggaagaaactttttagagatgatgggcacaattctagtggc
gaggagtctatcagtgcatctgaccatcagggtcacggtgaagacgacgacagcgacggc
gatgcagatcagcccttaatcaacacgatcaggtcttccgccgccaagctacgatccttg
aaggtctctcaacagggaacaagcagccacaaaggggtccctggcccatcaggaagcaat
agctga
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