| Entry |
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| Name |
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like
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| KO |
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| Organism |
mflo Miscanthus floridulus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mflo00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136487342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:mflo03041]
136487342
03009 Ribosome biogenesis [BR:mflo03009]
136487342
Enzymes [BR:mflo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136487342
Spliceosome [BR:mflo03041]
Complex A
U1 snRNP components
U1 related factors
136487342
Complex B
136487342
Ribosome biogenesis [BR:mflo03009]
Eukaryotic type
Pre-60S particles
Helicases
136487342
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
10:complement(137683922..137691004)
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| AA seq |
1395 aa
MAAQEAAAADSSGPRFAPDDPTLPAPWKALIDGATLYYWNPETNVTQYEKPAATAGVLPL
PAGPPPPTPAQVPEPAPGAYSQPNLQFGQAGQAGHQERPGQAAYPPQAGQLGQQQHTQQP
AQQQPFQQHVTAQHQASFQQVPYQQQQTHMPNQPHQYHSAHPQHMLYQHGPYMQPQQQQQ
APPYSYQADQQPQMPQTAYNQAQQPPMPQPTYNQGQSQQPPMPQPSYNQGQVQQPLMPQT
SYNQGQAQQPPMPQPSYNQGQQSMIPQSAYNQAQQPQILHGAYNQSQQPQGVRVSQSQGQ
HPQQSLSFHHPAQASQSPQVSQPQGLEMPSQQGKLQHGLPFTQYGKPPLSHGQQSPLLKD
DDGGVHEGKRTGFSLPLSQQRGQAPLPNQQLPSSHQHPGALSSQPNIPGVGGPLYPAKHL
PGGSSSAETNNMGFMNSPAQMHQGGADTNYQQKPVSGLAVLNHVGPSPIRPPMGFDRGNS
DGHIERDDPHSYGRFDGTKVLQQQPNLAPLPTSQNPMGMHNGPPYPRPDNFGGYNMAPPH
SVPNSHNLGPLPIGTSVRPPSSMFAPPDFPSVSSADAYRQHHEVTAMGENVPAPFMTFEA
TGFPPEILREIHAAGFSNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRR
CHNNPMLGPTVLVLAPTRELASQIQDEVVKFGQSSRVSCTCLYGGASKGPQLRELERGAD
IVVATPGRLNDVLEMKKISLHQVSLLVLDEADRMLDMGFEPQIRKIVDEIPNTRQTLMYT
ATWPKEVTKIAGDLLRDPVQVNIGSIDELVANKSITQYVEVVPPMDKQRRLEQILRDQER
GSKIIIFCSTKKMCDQLARGIGRNFNAVSIHGDKSQAERENVLNQFRTGRAPILVATDVA
ARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFLSEQDWKYAGDLVKLLQ
GANQHVPPQLQDMAARSASGGPRNQAAGMSRWDGPGGRRFEPGPGGPVGYGGVREGPGGF
GGREGPGGFGVRESPAMFGGPEGPDGLGGRAGPGGFGGREGPGGFGGHESPGGFGGRERE
GPGGFGGRKGPGGFGGRDGPGSGGFGGRGERGSGGFGSRGGASPGGFGGRGGRRDSSGFG
GRGRGDFSGFGGRGRGDSPGFGGRGRGDFSGGRGGRGRGFGGRGRSDRGPHDWFVSDGRG
RYDNRRGYGDKGRDRSCSRSPDRGRSRGYDRRTDSRSISRSRSRSRSWSRSRSRSGSWSR
SRSRSSSRSRSRSRSRDHGAAPERRPRARTGFDVLPPATGAAGSAPVPVPGPAPPPVPAL
APEQSLADTSTMSPMSPGGLVQPAAAAPLICGGNDNSFGGTPAGQPFQGTDAAFPSFPAG
ETFPGAAVQQAAPDV |
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| NT seq |
4188 nt +upstreamnt +downstreamnt
atggcggctcaggaggccgccgcagctgattcttcgggccctcggttcgctccggacgac
ccgacgctcccggcgccttggaaagctctgattgatggcgcgacgctgtactattggaat
ccagagacgaatgtgacccagtatgagaagcctgctgcaactgcaggggtgctccccttg
ccagcaggtcctccgccgccgacccctgcgcaggttccggaacctgcaccaggggcgtat
tcacagcctaacttgcagtttggccaagctggccaggcagggcaccaggagcgtcctggc
caggcagcttatcctcctcaggctggccagcttgggcagcagcagcatactcagcagcca
gctcagcagcaaccgtttcagcagcatgtcacggctcaacaccaggcttcgtttcagcaa
gtgccatatcagcaacagcagacgcacatgccaaatcagccgcatcagtaccacagcgcg
catcctcaacacatgctgtatcagcatggtccttacatgcaacctcagcagcaacagcag
gctccaccatattcgtatcaggcagaccagcagccacagatgccacaaaccgcctataat
caagctcagcagccaccgatgccgcaacctacctacaatcaaggtcagagtcagcagcca
ccgatgccgcaaccttcctacaatcaaggtcaagttcagcagccactgatgccgcaaact
tcctacaatcaaggtcaagctcagcagccaccaatgccacaaccatcctacaatcaaggt
cagcaatccatgataccacagtctgcctacaatcaagctcagcagcctcaaattctacat
ggtgcttataatcaaagccagcagccgcagggagttagggtttctcagagtcaagggcaa
catcctcaacaatctttgagctttcaccaccctgcccaagcttcgcagtcgccgcaggtt
tctcaacctcaaggacttgaaatgccatctcaacaaggtaaactgcagcatggattgccc
ttcactcagtatggaaaaccaccactgtcacatgggcaacaaagtccattgttgaaggat
gatgatggaggagttcatgaaggcaagcgaactggcttttcattaccacttagtcagcag
cgtggccaagctcctcttccaaatcagcagttaccttctagtcatcaacatcctggagcc
cttagtagccagccaaatatacctggagttggtgggccattatatcctgccaagcatctt
cctggtggatcatcctctgctgagactaataacatgggtttcatgaactcacctgcacaa
atgcatcaaggtggagctgatacaaactaccagcaaaaacctgttagtggccttgcagtt
ctaaatcatgttggtccatcaccaattcgacctccaatgggttttgataggggtaatagt
gatggtcacattgaaagagatgaccctcactcttatggaaggtttgatggaacaaaggtt
ctccagcagcagccaaatcttgctcctctcccaacttcacaaaatcctatgggcatgcat
aatgggccgccttatcctcgtccagacaattttggtggttataacatggcacctccacat
tcagtaccaaattcacataatcttggtccattgcctattggaacttcagtgaggccaccg
tcaagtatgtttgctcctccagattttccaagcgtatcttcagctgatgcataccgtcaa
caccatgaagtcactgccatgggtgagaacgttcctgctccgtttatgacatttgaggct
actggattccctccagagattctgagagagatccatgcagcaggcttttcaaatcccact
ccaattcaagctcagacatggcctgttgcactgcaaaaccgggacatagtagctattgcc
aagacagggtctggaaagacactggggtacctaattcctgcttttatacatctgaggaga
tgccacaataatccaatgttgggccctacggtattggttttggcccctactcgcgagctt
gcttcacaaatacaagacgaagtagttaagtttggtcaatcatctagagtttcctgcaca
tgcctatatggtggagcttcaaagggccctcagctaagagaacttgagcgtggagcagat
attgtggtagcaacaccaggacgtcttaatgatgttctggagatgaagaagattagcctc
catcaggtttcattacttgtgcttgatgaagcagaccgcatgcttgacatggggtttgag
ccacaaatacggaagattgtggatgagattcctaatactagacagactctaatgtacact
gccacttggccaaaggaggttacaaaaatagctggggatttactaagagatcctgtccag
gtcaacattggcagcatcgatgaacttgttgccaacaaatccatcactcagtatgtagag
gtggttccgcctatggacaagcagcgacgcctagagcagattcttagagatcaagaaagg
ggctcaaaaatcatcatattttgctcgactaagaagatgtgtgaccagcttgctcgtggt
attggtcgcaattttaatgctgtaagcattcatggtgataaatcgcaggccgaaagagag
aatgttctcaatcagtttcgaactggcagggctccaatattagtagccacagatgttgct
gctcgtggacttgatatcaaagatatcagagtggtaatcaattatgactttccaactggg
atagaggactatgtgcatcgcatagggcgtacaggaagagctggcgctactggtgtctcg
tacacttttctctctgaacaagattggaaatatgctggcgatttggtgaaactcttgcaa
ggtgccaaccagcatgtccctccacagctgcaagacatggctgcacgcagtgcttctgga
ggtccaagaaaccaggctgctgggatgagtcgctgggacgggcctggtggtcgtcgtttt
gaacctggtcctggtggccctgttggttatggtggtgttagggagggtcctggaggtttc
ggtggtcgtgagggcccgggtggatttggtgttcgagaaagcccagccatgtttggtggc
ccggaaggccctgatggcttgggtggccgggctggccctggtggcttcggtggccgggaa
ggccctggtggcttcggtggccatgagagccctggtggctttggtggccgagaacgggag
ggcccaggtggctttggtggcagaaagggcccaggtggctttggtggacgagatggccct
gggtcaggtggttttggtggtagaggggagcgtggatctggtggttttggcagtcgaggc
ggagcaagccctggaggctttggtggacgtggtggcaggcgtgattcttctggttttggt
gggcgtggcaggggtgatttttccggttttggtgggcgtggcaggggtgattctcccggt
tttggtgggcgaggtaggggagatttttctggtgggcgtggtggcagggggcgtggattt
ggcgggaggggacgttctgaccgaggcccacatgactggtttgtctcagatggacgtgga
cgatatgataaccgtcgtggatatggagacaagggcagggatcggagctgcagccgcagc
ccagatagaggccggtcacggggctatgacagaagaactgatagcaggagcattagcaga
agtaggagtcggagcaggagctggtcacgcagtagaagccgcagcgggagctggagccgt
agtcggagccgcagcagcagccggagtcgcagcaggagcaggagccgtgaccatggggca
gcaccggagcgcaggccccgagcaagaactggtttcgatgtgctgcctcctgcaactgga
gcagccggatctgcacctgtccctgtacctggaccagcaccaccacctgttcctgctctc
gcacctgaacaatcactggccgatacatctacaatgtcgccaatgtctccaggtggccta
gtccagccagctgctgctgcaccgttgatatgtggtgggaatgacaacagctttggcggc
acaccggctggccaacctttccaagggactgacgctgcattccccagttttcctgcaggc
gaaacgttcccaggcgcagcagttcagcaggctgctcctgatgtataa |
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