Miscanthus floridulus: 136487479
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Entry
136487479 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136487479
04121 Ubiquitin system [BR:
mflo04121
]
136487479
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136487479
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136487479
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136487479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
136487479
NCBI-ProteinID:
XP_066340730
LinkDB
All DBs
Position
1:complement(38768945..38771289)
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AA seq
385 aa
AA seq
DB search
MDEGQGVRYWCHRCEEVIDPMPEMKCPSCEGGFVEEMSSEGFESAMNARSDRSLSLLAPL
LFGMLGGSSRRSRLRREAMADDDADEDDEEDDSDHELEASSRRRRRRGSSALLRMLQTIR
DRDDVRGSDDTDSDTERDLELERPRRERMERRMARERIQERMERQRERARQIERVSARGR
ERTESLILINSNNEAIILQGTFGSDDNQEDSSNTSSGVSLGDYFLGPALDTLLQRLAESD
LNRSGTPPAKKEAVAALPTVNIEEVLGCSVCLEDFEMGAEAKQMPCQHKFHSHCILPWLE
LHSSCPICRFQLPTEETKNPCESASTAGAVNRDGDNAAASSSDTESSNRNGDNHSDSPIF
SALSTLFSDPFSSDDDESVPHSSEN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggccagggagttaggtactggtgccacaggtgtgaggaggtgatagatcct
atgcctgagatgaagtgcccaagctgtgagggcgggtttgtggaagagatgagctctgaa
ggcttcgaatcagctatgaacgcaagatctgatcgctccctctctctattggctccactg
ctgtttggtatgttggggggttcgtcgcgcagatcaagactcaggagggaggccatggct
gacgatgatgctgatgaggatgacgaagaggatgattcagaccatgagcttgaagcttcc
agtaggaggcggaggaggaggggctcgtcagcgcttttgaggatgctccagactatccgt
gaccgtgatgacgtaaggggctcggatgacactgacagtgatacagagagagacctggag
ctggagagaccgagaagggagaggatggagaggcggatggcgagggagcgaattcaggag
cggatggagaggcagagagagagggcaaggcaaattgagagagtgagtgctcgtggcaga
gagaggacagaaagcctaatactgatcaactccaacaatgaggctattattctgcaagga
acatttggatctgatgacaatcaagaggactcaagcaacacaagttctggtgtatcactt
ggggattactttcttggtcctgccttagatactctcttgcagcgtttggcggagagtgac
ctcaatcgttctggcacaccacctgccaagaaggaagcagtagctgcgctgccaactgtg
aacattgaggaagtgttgggctgttcagtctgtcttgaggattttgagatgggagcagaa
gcaaagcagatgccctgtcagcataagttccactcccactgcatacttccgtggctggag
ctccacagttcttgcccaatctgtcgatttcagttgcctactgaggagacgaagaaccca
tgtgaatcagccagcactgcaggggccgtcaacagagatggagacaatgctgctgcaagc
agtagtgatacagaaagtagtaaccgcaatggagacaaccattctgatagtcctatcttc
tctgctctgagcacactcttctctgatccattctcatctgatgatgatgaaagtgttccg
cactcttctgagaactga
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