Miscanthus floridulus: 136487614
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Entry
136487614 CDS
T10264
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136487614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136487614
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136487614
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136487614
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136487614
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
136487614
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
136487614
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP60 / Chaperonin
136487614
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
136487614
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136487614
Exosomal proteins of other body fluids (saliva and urine)
136487614
Exosomal proteins of breast cancer cells
136487614
Exosomal proteins of colorectal cancer cells
136487614
Exosomal proteins of bladder cancer cells
136487614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
136487614
NCBI-ProteinID:
XP_066340828
LinkDB
All DBs
Position
1:77278087..77284863
Genome browser
AA seq
576 aa
AA seq
DB search
MYRSAASLASKVRQAGSSSAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAV
KVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGD
GTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKNMARMISTSEEIAQV
GTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITN
SKTQKCELEDPLILIHDKKVTNMHAVVKVLEMALKKQKPLLIVAEDVESEALGTLIINKL
RAGIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLENVEPHMLGTCKKVTVSK
DDTVILDGSGDKKSIEERAEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEV
EVSEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNAL
KTPVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVD
AASVSSLMTTTESIIVEIPKEEAPAPAMGGMGGMDY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcggccgctagcctcgcctccaaggtgcggcaagccgggagcagctccgcc
gctcgccaggttggaagcaggcttgcctggagcaggaactatgctgctaaggacatcaag
ttcggtgttgaggcccgtgctctgatgttgagaggtgttgaggagttggcagatgcggtg
aaagtgacaatgggtcctaaggggcgcaatgtggttattgagcaaagctttggtgcaccg
aaagtcacaaaggatggtgtgactgttgcgaagagcattgaatttaaggatagagtaaag
aatgttggtgcaagccttgtgaaacaggttgctaacgcaactaatgacactgctggtgat
ggtaccacatgtgccactgttttgacaaaagcaatatttactgaggggtgcaaatctgtc
gcggctggaatgaatgcaatggatttaagacgtggaatctcaatggctgttgattctgtt
gtgaccaatcttaagaacatggccagaatgatcagcacttcagaagaaattgcacaggtg
ggtacaatatcagcaaatggggaaagggaaattggtgagcttattgccaaggctatggag
aaggttggcaaagagggtgtgattactattgcggatggtaacaccctttataatgagctt
gaagttgtggagggtatgaaacttgacagaggttacatctctccgtacttcattacaaac
tcaaaaacccaaaaatgtgaattggaagacccattgatcttaattcatgacaagaaggtt
acaaacatgcatgctgtggttaaggttttagaaatggctctaaagaaacaaaagcctcta
ctgattgttgcagaagatgtggaaagtgaagcattgggcactctgattattaacaagctt
cgtgcaggcatcaaggtctgtgccgtcaaagctcctggttttggagaaaacaggaaggca
aacttacaggaccttgctatccttactggaggagaggtaataactgaagagctaggaatg
aaccttgagaatgttgagcctcacatgctgggtacatgcaaaaaggtgaccgtctctaag
gatgacactgttattcttgatggatctggagacaagaaatctattgaagagagggcagag
cagattagatcagcaattgagaatagcacttcagattacgataaggaaaagctccaggag
cggttggcaaagctctctggaggtgttgctgtactgaagattggaggagccagcgaagta
gaagttagtgagaagaaggatagagtgacagatgcactgaatgctactaaagctgccgtt
gaagagggtattgtaccaggtggtggtgttgctcttctctatgcatcgaaggagcttgat
aaattgcagacagcgaactttgatcagaagattggtgtgcaaatcattcagaatgctttg
aagacacctgtacacaccattgcctccaatgctggggtggagggagcagtagttgtgggc
aagcttttggagcaagaaaatactgacctgggttatgatgctgctaaaggcgaatacgtt
gacatggtgaaggccggtatcattgacccactgaaggtgatcagaactgctttggtggat
gctgctagtgtgtcgtccctgatgaccaccacggaatccataattgtagagatccccaag
gaagaggcaccggctccagcaatgggtggcatgggtggaatggattactaa
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