Miscanthus floridulus: 136487763
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Entry
136487763 CDS
T10264
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136487763
04120 Ubiquitin mediated proteolysis
136487763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136487763
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136487763
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136487763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
zf-RING_11
zf-RING_16
zf-RING_5
zf-HC5HC2H
zf-C3HC4_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
136487763
NCBI-ProteinID:
XP_066340963
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All DBs
Position
10:complement(17401314..17405965)
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AA seq
505 aa
AA seq
DB search
MIRLPTYAAFSLLATASAAYYAFSSREQFYPAMVYLSTSKICFVLLLNMGLVAMCVAWQL
ARRLFLGSLREAEVERLNEQAWREVIEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA
QKRVEYIETTPSVPLLSHVRIVSFMVFLLTIDCLFLSNSLRSLIQKREASVAIFFSFEYM
ILATSTVSTFVKYIFYVSDVLMEGQWERKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATTEELDASDATCIICREEMT
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIIPADNGRAASAQQHGAQAGVQPAAGTA
TPSSEGAPGENMSRRQAKLEAAAAAASLYGRSFVYPPANTLNRSGPLLSTSSTPQSEASS
SNQSQKDQEMQFRNSNDGLVPLPFNANGAVGSGTSTRDLENSLQKAQENFIKSQIEMLQI
QLQMVQCGAAVSPSNNGNAEHTKND
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatccgactaccgacgtacgcggcgttcagcctgctggcgacggcgtccgcggcgtac
tacgcgttcagcagccgggagcagttctacccggcgatggtgtacctctccacctccaag
atctgcttcgtgctgctcctgaacatgggcctcgtcgccatgtgcgtcgcctggcagctc
gccaggcgcctcttcctcggctcgctccgggaggctgaggtcgagcgcctcaacgagcag
gcctggcgggaggtcatcgagatcctcttcgccgtcaccatcttccggcaggacttctcg
gtgtccttcctcgccatggtcgccgcgctgcttctcgtcaaggcgctgcactggctcgcg
cagaagagggtcgagtacatcgagaccacgccctccgtgcccttgctctcgcacgtcagg
atcgtctccttcatggttttcctgctcaccatcgactgcctcttcctgtctaactcgctt
aggtcactcatacagaagcgggaggcgtccgttgccatcttcttctcctttgagtatatg
atactagcaacatccacagtatcaacatttgtgaagtatatattctatgtcagtgacgtg
ctaatggaaggccaatgggagagaaaggcggtgtatacattttacttggagctcatcagt
gaccttgtgcacctgtccttatacatgctcttcttcatagctatcttcctaaactatggt
gtcccgctgcacttgattcgtgagctatatgagaccttccgcaacttcagaattcgcatt
gcagattatgtacgctacagaaagatcacttccaacatgaatgaacgctttccagatgct
acaacagaagagctcgatgcgagcgatgctacatgtattatttgccgtgaggagatgact
acagcaaagaaactgctctgtgggcatctgttccatgtgcattgtctaaggtcttggtta
gagcgccagcacacttgccctacatgcagagctccaatcattcccgcagataatggacgt
gctgcatcagcacaacaacatggagctcaagccggagttcagcctgctgcaggtactgct
actccatcctcagaaggagcaccaggtgagaacatgagcaggcgccaagcaaaacttgaa
gctgctgcagcggcagcttctttatatggaagatcttttgtttatcctccagcaaacacc
ctaaacaggtctggtcctctgctgtctacatcaagcacaccacaatctgaagcaagtagc
tccaatcagtcacaaaaagaccaagaaatgcagttccgaaacagcaacgatggtttagtg
cctctgccttttaatgcaaatggtgctgttggttcaggaacaagcacaagggatcttgaa
aattcactgcagaaggcacaagaaaactttattaaaagccagattgagatgttacaaatc
caactgcaaatggtgcagtgtggcgccgctgtgtcgcccagtaacaatgggaatgctgag
cacacaaagaatgactga
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