Miscanthus floridulus: 136487992
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Entry
136487992 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
136487992
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
136487992
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
SnoaL_2
Motif
Other DBs
NCBI-GeneID:
136487992
NCBI-ProteinID:
XP_066341155
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Position
10:complement(10250445..10273589)
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AA seq
551 aa
AA seq
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MKDLKDWLSTGEYLGNLDGDGWVAAALHSTLAPAACNSIGSSEVFLEREREREREVFNYM
AISDDIQRYMPSAADRVAPRCSPLAYKEAVLLVDPMEPQFKREVDDKYEYSLDNKDNAVQ
GWIRGSRSRSRTRTRTNPAMGFWVITPSNEFKSGGPMKQELTSHVGPVSMAVFLGTHYTG
IDIMLNLGDGEYWKKVMGPVFIYLNSSPNNGSDSRALWDDAKAQARAEAGNWPYSFPESP
DFAKAGDRGTVTGTLLVRDAFASKGGDVPAATAFVGLAAPGGQPGSWATQCKGYQFWTRA
TASGRFSIGGVRAGTYSLDAWVPRFLGDYVHTSTVTVTPGAAVDLGSLVFVPPRSGPTLW
EIGVPDRTAAEFFVPDADPRYASKLFVGKDGYRQYGLWERYAELHPAGNDLVFTVGQSDY
SKDWFFAHVTRMDGNVSTPTTRQIRFNLDHVVANGTYTLRCSCSCLNVQTHVRVNGRVAR
EAVFSTPEFGNGNAITRHGIHGGVQWSFEFPIRGYLLRQGENSISITQTMAFGPFLGVMY
DYLRLEGPPPA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctcaaggattggctcagcactggagagtaccttggcaatctggatggagat
ggttgggtcgccgctgcactgcacagtacgcttgcgccggctgcttgtaactcgattggg
tccagcgaggtgtttttagagagagagagagagagagagagagaggtgttcaactacatg
gcgatctcagacgatatacagaggtacatgcccagcgcagcagacagagttgcgccacgt
tgctctccactggcctacaaggaggccgtcctgctggtcgaccccatggagccacagttc
aagagggaggtggacgacaagtacgagtactctctggacaacaaggacaacgccgtccaa
ggctggatcagaggcagccgcagccgcagccgcacccgcacccgcaccaacccggccatg
ggcttctgggtcatcacacccagcaacgagttcaagagcggcggccccatgaagcaggag
ctcacctcccacgttggacccgtctccatggccgtgtttctagggacgcattacactggg
atcgacataatgctgaacctgggcgacggcgagtactggaagaaggtgatgggcccggtg
ttcatctacctcaactccagccccaacaatggcagcgacagccgagctctctgggacgac
gccaaggcgcaggcgcgagcggaagccggcaactggccgtacagcttcccggagtcgccg
gacttcgccaaggcgggcgacaggggcacggttaccggcactctcctggtcagggacgcg
ttcgcgagcaagggcggtgacgtgcctgctgcaacggcgttcgtcgggctcgccgcgccc
ggcgggcagcctggctcctgggcgacacagtgcaagggttaccagttctggacgagggcg
acggccagcggccggttcagcatcggcggcgtccgggctggaacctacagcctcgacgcg
tgggttccccggttcctcggagactacgtgcacacctccacggtgaccgtgacgccaggt
gccgccgttgaccttggtagcctcgtgttcgtgcccccgaggtcgggcccgacgctgtgg
gagatcggcgtcccggatcggacggcggcggagttcttcgtccccgacgccgaccccaga
tacgccagcaagctcttcgtggggaaagacgggtacaggcagtacggcctgtgggagagg
tacgccgagctgcatcctgctggaaatgacctcgttttcacggttggtcagagcgactac
tcaaaggactggttcttcgcacacgtcacaaggatggatggcaacgtcagtacaccaacg
acacggcagatacgcttcaacctcgaccatgtcgtggcaaacggcacctacaccctgcgt
tgctcttgcagctgcttaaatgtccagactcacgtgcgcgtgaacggcagagtggctagg
gaagccgtgttcagcacgccggagttcggcaacggcaacgccatcacgcggcacggcatc
cacggcggcgtgcagtggagcttcgagttccccatcaggggctacctgctgcggcaaggc
gagaacagcatcagcatcacgcagacgatggcgttcgggcccttcttgggggtcatgtac
gactacctcaggctggaagggcctccgccggcatga
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