KEGG   Miscanthus floridulus: 136488656
Entry
136488656         CDS       T10264                                 
Name
(RefSeq) uncharacterized protein
  KO
K17302  coatomer subunit beta'
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mflo04131]
    136488656
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mflo04147]
    136488656
Membrane trafficking [BR:mflo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    136488656
Exosome [BR:mflo04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   136488656
SSDB
Motif
Pfam: Pkinase WD40 WD40_Prp19 PK_Tyr_Ser-Thr WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_TEP1_C WDR90_beta-prop_4th ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_SCAP Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_VPS8 YukC ABC1 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 136488656
NCBI-ProteinID: XP_066341605
LinkDB
Position
10:54303074..54332637
AA seq 646 aa
MDDDLEKKLEALEQVLADANAEPIPLSYACLRKVTNDFSQEIGRGGFGVVYMGNLQNGKV
AVKKLTSLDFFEEFEDELLCLIRVKHKNIVRFLGYCSDTSKEAVKHGGDYVVAEDRKRYL
CFEYVPNKSLKEYLEDEYSGCRWDTTYQLIEGICHGLRYLHNEERIIHLDLKPENILLDS
NMVPKITDFGLSRRFVNQSRKITEYVRGTLGYIAPEYINNKEISFKTDIYSLGIVMVKLL
RGSNNISDFQNVGGNDKNMVREKEADNELLEFQPPELRFHFFEKQPPQEDEFVIKHCVVT
NEELLTDTSQGKPGLGYKNFFMEVEKVDVDIVRTHGMIADPQAGTTSEVMSTKKFGTLYS
TDVHPTKPWIATGHSKGQVYIWNCQKKEMVNSFEVTKDQEVLSVKFIPPKEWILAGGGNA
CIYVYSYDTRKMVKTFQAHNNQITSLAIHPDEPYVLSASHGRKIKLWDWENGWSNESRQK
FLGHTGSVTHVVFNPKDAASVSEDGMIKVWSIDCGNANFTLHGHTSNVRCLDYFRHGDAQ
ILIAGFDDATAEIWDLHKKERVQTLKGHTARINAVFSHPNRPILMTGSSDGTVRLWNSNS
FRLQGILNFVMRKVYALACMEDSRRIVIGHSDGIAIVDIDHYDTAN
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggacgatgatctagagaaaaaacttgaagctttggaacaggtattagctgatgcgaat
gcagagccaatccctttgtcatatgcatgtttgagaaaggttacaaatgatttttcacaa
gagatcggtcgtggtggatttggagtggtttatatgggaaatcttcagaatgggaaagtt
gctgtgaagaagcttacctcacttgatttttttgaggagtttgaggatgaacttctatgt
ttgataagagttaaacacaaaaatatagtgagatttttaggctattgctctgatacatca
aaagaagcggtaaaacatggtggtgattatgttgtggctgaagaccgaaagaggtacctc
tgctttgaatatgtacctaacaaaagcctaaaggagtatctcgaagatgaatatagtgga
tgtcgatgggacacaacctatcagttgattgagggaatttgccatggtttgcgttatctt
cacaatgaagaacgtataattcatttggatctcaaaccagaaaatattttgctggattct
aacatggttccaaaaataactgactttggcttatcaagacgcttcgtgaatcaatcacga
aaaatcacggaatatgtccgcggaacactggggtatattgcacctgaatatataaacaac
aaggaaatatctttcaagacggacatatatagtttgggcatcgtgatggtaaaactatta
aggggaagcaacaatatatctgatttccaaaatgtaggtggaaatgataagaacatggtg
cgggaaaaggaagcagacaatgagctgcttgaattccagcccccagagcttcgattccat
ttcttcgagaagcagccaccacaagaagacgagtttgtaatcaagcattgcgttgtgacc
aacgaggagctactaacggacacaagccaaggaaaacctggccttggttataaaaacttt
tttatggaagttgaaaaggtggatgttgatatagtgcgtactcatggtatgattgctgac
ccacaagctgggacgacttctgaggtcatgtcgacaaagaagttcggtacattgtattcc
acagatgtgcatccaacaaaaccatggattgcaaccggtcattccaaggggcaggtctac
atttggaactgtcagaaaaaggaaatggtaaactcgtttgaagtcacgaaggatcaggaa
gttttgagtgttaaatttattcccccaaaagaatggattctggccggtggtggtaatgct
tgcatctatgtgtacagctatgatacacggaagatggtcaaaacgttccaggcacataat
aaccagatcacttctttggctattcatccagatgagccttatgtgttgtcagcatcccat
gggagaaaaatcaagttgtgggactgggaaaatggctggagtaatgagtccaggcaaaag
tttcttgggcacacaggatcggtgacacatgtagtttttaaccccaaggatgctgcgagt
gtttctgaggacggcatgattaaggtctggagtattgattgtggtaacgctaatttcaca
ttgcatgggcatacgtccaatgtgagatgtttggattactttagacacggtgatgctcaa
atactgattgcaggcttcgacgatgcgactgctgagatttgggacttgcacaagaaggaa
cgggttcaaacactcaaaggacatacagccagaatcaatgctgtattttcccatccaaat
cgtccaatactaatgacaggttcctctgatggtaccgttcgtctttggaactccaacagc
ttcaggcttcagggcatactcaactttgttatgagaaaagtctacgcgttagcatgtatg
gaggattcaagaaggatcgttatcgggcacagcgacggaatagcaattgtggatattgat
cattatgacactgcaaactga

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